Gene Information

Name : AORI_1355 (AORI_1355)
Accession : YP_008010347.1
Strain : Amycolatopsis orientalis HCCB10007
Genome accession: NC_021252
Putative virulence/resistance : Virulence
Product : manganese/iron transport system substrate-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1393271 - 1394185 bp
Length : 915 bp
Strand : -
Note : -

DNA sequence : 
ATGGCGAATCTGCGCAAGACCGTGTGCGCGCTGGCGGCGTCGGCACTCGTCCTGTCCGCGTGCGGCGGTCCCGCCGACAG
CACGGACGACAAGCGGCCCGTGGTGCTGACGACGTTCACGGTGCTGGCGGACATCGCCTCGAACGTCGCGGGCGACAAGC
TGAAGGTCGAGTCGATCACCAAACCCGGCGCGGAGATCCACGGCTACGAGCCCACGCCGGACGACATCAAGAAGGCCGCG
AAGGCCGACTTGATCCTCGACAACGGACTGAACCTGGAGGCGTGGTTCGCCCGGTTCGTCAAGGAGAGCGACGCTCCGCA
CAAGGTCGTCAGCGAGGGCGTCCAGCCCATCGCCATCGGCGAAGACGCCTATCAGGGAAAGCCGAACCCGCACGCGTGGA
TGTCCCCGAAAAATGTGGGTATCTACGTGGACAACATGGTGAAGGCGTTCAGCGAGCTCTCCTCCGGCGACGCCGCCGTG
TTCAAGGCCAACGGCGATGCCTACAAGGCGAAACTGCAGGAGGTGCAGGACGAGATGACGAACGCGCTGAGCACCCTGCC
GAAGAACGAACGCGCCCTGGTGACCTGCGAAGGCGCCTTCTCCTACCTCGCGCGCGACACCGGTCTCACCGAGCGGTACA
TCTGGGCGGTCAACGCCGAACAGCAGGCGACCCCGCAGCAGATCACCCGCGCCATCGAGTTCGTCAAGGAGAACAAGGTC
CCCGCGGTGTTCTGCGAGTCGACCGTCTCCGACGCCCCGATGCAGCAGGTCGTCTCCGCGACGGGGGCCGCGTTCGGCGG
CGTGCTCTTCGTCGATTCCCTGTCCGGGCCGGAAGGTCCGGTGCCGACGTACCTCGACCTCATCCGCCACGACTCGAAGA
CGATCGTCGCCGCGCTCACCGGGGCGAAACCGTGA

Protein sequence : 
MANLRKTVCALAASALVLSACGGPADSTDDKRPVVLTTFTVLADIASNVAGDKLKVESITKPGAEIHGYEPTPDDIKKAA
KADLILDNGLNLEAWFARFVKESDAPHKVVSEGVQPIAIGEDAYQGKPNPHAWMSPKNVGIYVDNMVKAFSELSSGDAAV
FKANGDAYKAKLQEVQDEMTNALSTLPKNERALVTCEGAFSYLARDTGLTERYIWAVNAEQQATPQQITRAIEFVKENKV
PAVFCESTVSDAPMQQVVSATGAAFGGVLFVDSLSGPEGPVPTYLDLIRHDSKTIVAALTGAKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 5e-73 56
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 5e-73 56
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 4e-73 56
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-73 56
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 5e-73 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AORI_1355 YP_008010347.1 manganese/iron transport system substrate-binding protein BAC0349 Protein 2e-73 56
AORI_1355 YP_008010347.1 manganese/iron transport system substrate-binding protein BAC0439 Protein 2e-66 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AORI_1355 YP_008010347.1 manganese/iron transport system substrate-binding protein VFG0525 Protein 2e-73 56