Gene Information

Name : AORI_1354 (AORI_1354)
Accession : YP_008010346.1
Strain : Amycolatopsis orientalis HCCB10007
Genome accession: NC_021252
Putative virulence/resistance : Virulence
Product : manganese/iron transport system ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1392531 - 1393274 bp
Length : 744 bp
Strand : -
Note : -

DNA sequence : 
GTGACGGCCGCGATCCGCGTCGAAGGCGTCACCGTCCACTATGGCGACGTCCTCGCGCTCGACGGTGTCGACGTCACCCT
CGACCACGGCCGCGTCTGCGGGCTGGTCGGGATGAACGGTTCCGGCAAGTCGACGCTGTTCAAGACGATCATGGGCATGG
TCCGGCCGGACGCCGGCACGGTCTCGATCGACGGCGGCACCCCCGTCCGCGCGCGTAAGACCGGCGTGATCGGGTACGTG
CCGCAGAGTGAGGACGTCGACTGGTCGTTCCCGTTGTCCGTGCGGGATGTCGTGATGACCGGCCGCTACGGACGGCTCGG
CTTCACCCGCCGTCCGCGTCGCGCTGACCACGAAGCCGTCGACCACGCGCTGGAGCGGGTCGAACTGACCGACCTCGCCG
GACGCCAGATCGGCCAGCTGTCCGGTGGGCAGCGCAAGCGCGCGTTCGTCGCGCGCGGGATCGCGCAGGGCGCACGTGTC
CTGCTGCTGGACGAGCCGTTCGCCGGCGTGGACAAGCGCTCCGAGGCCACGATCACCCGGCTGCTCAAGGAACTCGCGGC
CGGCGGCGCCGCGGTCCTGATCTCCACCCACGATCTGCACGCGCTGCCCGGCCTGGCCGACGAGGCGATCCTGCTGATGC
GCAAGGTGCTCGCGCACGGCTCCCCCGGCGAGGTGCTCCGCCCCGAGAACCTCGCGCTGGCCTTCGGACTCGACGTCCTG
CAACGGGAAGAAGAACCCGCGTGA

Protein sequence : 
MTAAIRVEGVTVHYGDVLALDGVDVTLDHGRVCGLVGMNGSGKSTLFKTIMGMVRPDAGTVSIDGGTPVRARKTGVIGYV
PQSEDVDWSFPLSVRDVVMTGRYGRLGFTRRPRRADHEAVDHALERVELTDLAGRQIGQLSGGQRKRAFVARGIAQGARV
LLLDEPFAGVDKRSEATITRLLKELAAGGAAVLISTHDLHALPGLADEAILLMRKVLAHGSPGEVLRPENLALAFGLDVL
QREEEPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 1e-49 49
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-49 49
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-49 49
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 8e-50 49
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 8e-50 49
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 3e-36 41
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 4e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AORI_1354 YP_008010346.1 manganese/iron transport system ATP-binding protein BAC0350 Protein 9e-50 49
AORI_1354 YP_008010346.1 manganese/iron transport system ATP-binding protein BAC0440 Protein 2e-55 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AORI_1354 YP_008010346.1 manganese/iron transport system ATP-binding protein VFG0526 Protein 8e-50 49