|
Name : AORI_1353 (AORI_1353) Accession : YP_008010345.1 Strain : Amycolatopsis orientalis HCCB10007 Genome accession: NC_021252 Putative virulence/resistance : Virulence Product : manganese/iron transport system permease protein Function : - COG functional category : - COG ID : - EC number : - Position : 1391662 - 1392534 bp Length : 873 bp Strand : - Note : - DNA sequence : GTGAGTCTCTACGACCTGTTCCTCGAACCACTGAGCTACGACTTCATGGTGCGGGCGCTGGCGTCCACGGTCGTCGCGTC CGCGGTCTGCGCGGTGCTCTCCTGCTGGCTGGTGCTGATCGGCTGGTCGCTGATGGGTGACGCGGTCTCGCACGCGGTAC TGCCCGGCGTCGTGCTCGCGTACGTCCTCGGCGCGCCCTTCGCGCTGGGCGCCGTGGTCTTCGGTTTCCTCGCCGTGGCG CTGATCGGCGTCGTCCGGGACACCAGCCGGGTCAAGGAGGACGCCGCGATCGGCATCGTGTTCACCACGCTGTTCGCGCT CGGGCTGGTGCTGATCTCGGTGACGCCGAGCCAGACCGACCTGAACCACATCATCTTCGGCAACCTGCTCGGCGTCGACA CCTCCGATCTGATCCAGATCGGCGTCCTCGGCGCGATCACACTCACCGTGCTGGTGCTCAAACGCCGCGATTTCACCTTG TACGCCTTCGATCCCACGCACGCGCACGCGATCGGGCTCAACCCGCGCGTACTCGGCGCCGCGCTGCTCGGCCTGCTCGC GCTGACGGCGGTGGTGGCGCTGCAGGTGGTCGGCGTGATCCTGGTGGTGGCGATGCTGATCATCCCCGGCGCGACGGCGT ACCTGCTGACCGACCGGTTCGGCCGCATGCTGGTGATCGCGCCGTCGTTCTCGGTGCTCGCGGCGGTGGCCGGGCTGTAC CTGAGCTACCACCTCGACACCGCGTCCGGCGGGATGATCGTGCTGGTGCAGGGCGCCGGGTTCACGCTGGTGTACCTGTT CGGGCCGCGGCACGGGATCGTCGGGAAGCGGCTGGCCAAGCGTCGCCGGGAGACGGCACGGGCGGCGGCGTAA Protein sequence : MSLYDLFLEPLSYDFMVRALASTVVASAVCAVLSCWLVLIGWSLMGDAVSHAVLPGVVLAYVLGAPFALGAVVFGFLAVA LIGVVRDTSRVKEDAAIGIVFTTLFALGLVLISVTPSQTDLNHIIFGNLLGVDTSDLIQIGVLGAITLTVLVLKRRDFTL YAFDPTHAHAIGLNPRVLGAALLGLLALTAVVALQVVGVILVVAMLIIPGATAYLLTDRFGRMLVIAPSFSVLAAVAGLY LSYHLDTASGGMIVLVQGAGFTLVYLFGPRHGIVGKRLAKRRRETARAAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 2e-37 | 47 |
| sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 2e-37 | 47 |
| sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 5e-37 | 47 |
| sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 4e-37 | 47 |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 2e-37 | 47 |
| sitC | AAD41067.1 | SitC | Virulence | centisome 63 pathogenicity island | Protein | 3e-38 | 45 |
| sitC | YP_217783.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 4e-38 | 45 |
| sitC | NP_461784.1 | permease | Virulence | SPI-1 | Protein | 4e-38 | 45 |
| sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 3e-38 | 45 |
| sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 3e-38 | 45 |
| EF0576 | NP_814341.1 | cation ABC transporter permease | Not tested | Not named | Protein | 1e-28 | 43 |
| ef0094 | AAM75297.1 | EF0094 | Not tested | Not named | Protein | 9e-29 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| AORI_1353 | YP_008010345.1 | manganese/iron transport system permease protein | BAC0442 | Protein | 8e-41 | 49 |
| AORI_1353 | YP_008010345.1 | manganese/iron transport system permease protein | BAC0352 | Protein | 2e-37 | 47 |
| AORI_1353 | YP_008010345.1 | manganese/iron transport system permease protein | BAC0441 | Protein | 4e-39 | 46 |
| AORI_1353 | YP_008010345.1 | manganese/iron transport system permease protein | BAC0351 | Protein | 2e-38 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| AORI_1353 | YP_008010345.1 | manganese/iron transport system permease protein | VFG0528 | Protein | 2e-37 | 47 |
| AORI_1353 | YP_008010345.1 | manganese/iron transport system permease protein | VFG0527 | Protein | 2e-38 | 45 |
