Gene Information

Name : smpB (AORI_1250)
Accession : YP_008010242.1
Strain : Amycolatopsis orientalis HCCB10007
Genome accession: NC_021252
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1281507 - 1281965 bp
Length : 459 bp
Strand : +
Note : -

DNA sequence :
GTGATCGTGTCGAACCGCAAGGCTCGCCACGATTACTCCATCCTCGACACCTACGAAGCCGGTCTCGTGCTCGTCGGTAC
CGAGGTGAAGAGCCTGCGTGAAGGACGGGCATCGCTGGCCGACGCGTTCGCCACGGTGGACGACGGCGAGGTCTGGCTCC
GCAACGTGCACATCCCCGAGTACGTGCAGGGCACGTGGACGAACCACACGCCGCGGCGCACCCGGAAACTGCTCTTGCAC
CGCCAGGAGATCGAGAAGCTCATCGGCAAGACCAAGGAGAGCGGCCTCTCGCTGGTCCCGCTGTCGATGTACTTCAAGGA
CGGCAAGGTCAAGGTCGAGATCGCGCTGGCGAAGGGCAAGAAGTCCTACGACAAGCGGCAGGACATCGCCAAGCGGGACG
CGCAGCGCACCATCAGCCGGGCCATGGGCCGGGCGCTCAAGGGCCGGTACAACGATTGA

Protein sequence :
MIVSNRKARHDYSILDTYEAGLVLVGTEVKSLREGRASLADAFATVDDGEVWLRNVHIPEYVQGTWTNHTPRRTRKLLLH
RQEIEKLIGKTKESGLSLVPLSMYFKDGKVKVEIALAKGKKSYDKRQDIAKRDAQRTISRAMGRALKGRYND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 2e-46 65
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 2e-33 52
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 7e-23 43