Gene Information

Name : AORI_1108 (AORI_1108)
Accession : YP_008010100.1
Strain : Amycolatopsis orientalis HCCB10007
Genome accession: NC_021252
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1114585 - 1115265 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence : 
GTGGAAACACCGTTGTTACACGGGCTGAGCCTGCACAAGGCCTTCGGTCCGAACCAGGCGCTGGCCGGGGCCGGGTTGAC
GCTCGAACCCGGCGAGATCGTCGCGGTCATGGGGCCGTCGGGGTCCGGGAAATCGACCCTGCTGCACTGCCTGTCCGGGA
TCGTCCGGCCCGATGAAGGCCGGGTGCGCTTCCGCGGGCGTGACCTCGCGAGCATGTCCGACTCCGAACGCAGTGCCCTG
CGGCGCACTGAATTCGGCTTCGTCTTCCAGTTCGGGCAGCTCGTGCCGGAGCTGACCTGCCTGGAGAATGTCGCGCTGCC
GCTGCGGCTGAGCGGGATGAGGCGCCGCCCCGCCGAGCGGATCGCGCGCGGCTGGCTCGACCGGCTGACGGTCGGCGACG
TCGGCGGCAGCACACCCGGCCAGATTTCCGGCGGGCAGAGCCAGCGGGTCGCGATGGCCAGGGCACTGGTCACCGAACCG
TCGGTGATCTTCGCCGACGAGCCGACCGGCGCGCTGGACACGCTCAGCGGAGAACTGGTCATGCGCCTGCTGTCCGAGAC
GGCGAAACAGACCGACGCCGCCGTCGTCCTGGTCACCCACGAACCGCGGGTGGCCGCCTACTCCGACCGGGAGGTCATCG
TGCGCGACGGCCGGACACGTGAACCGGCGGTGACCCGATGA

Protein sequence : 
METPLLHGLSLHKAFGPNQALAGAGLTLEPGEIVAVMGPSGSGKSTLLHCLSGIVRPDEGRVRFRGRDLASMSDSERSAL
RRTEFGFVFQFGQLVPELTCLENVALPLRLSGMRRRPAERIARGWLDRLTVGDVGGSTPGQISGGQSQRVAMARALVTEP
SVIFADEPTGALDTLSGELVMRLLSETAKQTDAAVVLVTHEPRVAAYSDREVIVRDGRTREPAVTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-33 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AORI_1108 YP_008010100.1 ABC transporter-like protein NC_008702.1.4606598. Protein 5e-31 46
AORI_1108 YP_008010100.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-37 43
AORI_1108 YP_008010100.1 ABC transporter-like protein CP001581.1.gene598.p Protein 1e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AORI_1108 YP_008010100.1 ABC transporter-like protein VFG2059 Protein 5e-17 43