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Name : kdsD (PFLCHA0_c09340) Accession : YP_007998230.1 Strain : Pseudomonas fluorescens CHA0 Genome accession: NC_021237 Putative virulence/resistance : Virulence Product : arabinose 5-phosphate isomerase KdsD Function : - COG functional category : - COG ID : - EC number : 5.3.1.13 Position : 1066810 - 1067784 bp Length : 975 bp Strand : - Note : - DNA sequence : ATGAGCCAATCCAGCGACCTGATTCAATCAGCACAACGCACCATCCGCCTCGAACTACAGGCAGTAGAAGGCTTGCTGCC CCATATCGACGCAGATTTCGTACGCGCTTGCGAGATGATTCTGGCCAGCAAAGGCCGCGTAGTGGTGGTCGGCATGGGCA AGTCCGGGCACGTCGGCAACAAGATTGCCGCTACCCTGGCCAGCACCGGGACCACGGCCTTCTTCGTCCATCCTGCCGAA GCCAGCCATGGCGACATGGGCATGATTACCCGCGATGACGTGATCCTGGCCCTCTCCAACTCCGGCTCCACCAACGAAAT CGTCACCCTGCTGCCCCTGATCAAGCGTCTGGGCATCCAGTTGATCAGCCTCACCGGCAACCCCGAGTCGCCGCTGGCCA AGGCGGCTGACGTCAACCTCAACGTCCACGTCGAGCACGAAGCCTGCCCGCTGAACCTGGCACCGACCTCCTCGACCACC GCCGCCCTGGTCATGGGCGACGCCCTGGCCGTGGCGCTGCTGGAAGCCCGGGGTTTCACTGCCGAGGACTTTGCCTTCTC CCACCCGGGTGGTGCCCTGGGCCGTCGCCTGCTGCTCAAGGTGGAGAACGTCATGCACGAAGGCAGCGATCTGCCCCAGG TGCAACGCGGCACCCTGCTCAAGGACGCGCTCATGGAAATGACCCGCAAGGGCCTGGGCATGACCGTGATCCTGGAGGCC GACGGCCGCCTGGCCGGGATCTTCACCGACGGCGACCTGCGTCGCACCCTGGATCGGGCCATCGATATACACCATGCCAC CATCGATTCGGTGATGACCCCTCATGGCAAGACCGCACGTGCCGACATGCTGGCCGCCGAAGCCCTGAAAATCATGGAAG ACCACAAGATCAGCGCCCTGGTGGTGGTGGACAAGGAAGACCGGCCGATCGGCGCCTTGAACATGCACGACCTGCTGCGC GCGGGAGTGATGTGA Protein sequence : MSQSSDLIQSAQRTIRLELQAVEGLLPHIDADFVRACEMILASKGRVVVVGMGKSGHVGNKIAATLASTGTTAFFVHPAE ASHGDMGMITRDDVILALSNSGSTNEIVTLLPLIKRLGIQLISLTGNPESPLAKAADVNLNVHVEHEACPLNLAPTSSTT AALVMGDALAVALLEARGFTAEDFAFSHPGGALGRRLLLKVENVMHEGSDLPQVQRGTLLKDALMEMTRKGLGMTVILEA DGRLAGIFTDGDLRRTLDRAIDIHHATIDSVMTPHGKTARADMLAAEALKIMEDHKISALVVVDKEDRPIGALNMHDLLR AGVM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 1e-57 | 45 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 7e-58 | 45 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 2e-57 | 45 |
