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Name : clpV (PFLCHA0_c60520) Accession : YP_008003284.1 Strain : Pseudomonas fluorescens CHA0 Genome accession: NC_021237 Putative virulence/resistance : Virulence Product : protein ClpV Function : - COG functional category : - COG ID : - EC number : - Position : 6713888 - 6716563 bp Length : 2676 bp Strand : + Note : - DNA sequence : ATGGGTGAAATCAGTCGCGCGGCGCTGTTCGGCAAACTCAACAGCGTTGCCTACAAAGCCATCGAAGCCGCCACGGTCTT CTGCAAATTGCGGGGCAACCCCTATGTGGAACTGGCCCACTGGTTTCACCAGTTGCTGCAACTTACGGACTCGGACCTGC ACCGCATCATCCGCCAGTTCAACCTGGAGCCGGCGCGCCTGGCCAAGGACCTGACCGAGGCCCTGGACCGCCTGCCCCGG GGCTCGACCTCGATCACCGACCTGTCGTCCCACGTCGAGGAGGCGGTGGAGCGCGGTTGGGTCTACGGCAGCCTGATGTT CGGCGAAAGCCAGGTGCGCACCGGCTACCTGGTGATCGGCATCCTCAAGACCCCGAGCCTGCGCCATGCGTTGCTGGGGC TGTCCCGCGAGTTCGACAAGATCAAGGTCGAGACCCTGTGCGAGCGCTTTGACGAATACATCGGCGACTCGCCGGAAAAC GCCCTGAGCGCCAGCGACGGCTTCAGTGCCGGTGCGGTGCCCGGCGAAGCCAGCGGCGCCATGGCCCCCAGCGCCCTGGG CAAGCAGGAAGCCCTCAAGCGCTTCACCGTCGACCTCACCGAACAGGCCCGCAGCGGCAAGCTCGACCCCATTGTCGGCC GTGACGAAGAGATCCGCCAACTGGTGGACATCCTCATGCGCCGCCGGCAGAACAACCCGATCCTCACCGGTGAAGCCGGG GTGGGCAAGACCGCGGTGGTGGAAGGTTTCGCCCTGCGCATCGTCGTCGGCGACGTGCCGCCGGCGCTCAAGGACGTTGA ACTGCGCAGCCTCGACGTCGGCCTGCTGCAGGCCGGCGCCAGCATGAAGGGCGAGTTCGAACAGCGCCTGCGCCAGGTCA TCGAGGACGTCCAGGCCTCGCCCAAGCCGATCATCCTGTTCATCGACGAAGCCCACACCCTGGTGGGCGCCGGTGGCGCC GCCGGCACCGGCGACGCGGCCAACCTGCTCAAGCCGGCTCTGGCCCGTGGCACCCTGCGCACCGTGGCCGCCACCACCTG GGCCGAGTACAAGAAGCACATCGAGAAAGACCCGGCCCTGACCCGGCGCTTCCAGGTGGTGCAAGTAGCCGAACCTTCGG AAGACAAGGCGCTGCTGATGATGCGCGGCGTGGCCTCGACCATGGAACAGCACCATCAGGTGCAGATCCTCGACGAAGCC CTGGAGGCCTCGGTCAAACTGTCCCATCGCTACATTCCCGCGCGCCAGTTGCCGGATAAATCCGTCAGCCTGCTGGATAC CGCTTGCGCCCGCGTCGCCATCAGCCTGCACGCCGTGCCGGCCGAGGTGGACGATAGCCGCCGGCGCATCGAGGCCCTGG AAACCGAGCTGCAGATCATCGCCCGGGAACAGGCGATCGGCGTTGCCATTGGCAACCGCCAGGTCAACAGCGAGAACCTC CTGACTGCCGAGCGCGAGCGCCTGGCCGAGCTGGAAAGTCGCTGGGCACAAGAGAAGACCCTGGTGGACGAACTGCTGGC AACCCGCGCCCAATTGCGGGAAAACGTCGGCCTGGTGGACAGCGACGTCGGCGACGACAGCCACGGCCTGCGGGAAAAAC TGGTGGACCTGCAACAGCGCCTCAGCACCCTGCAAGGCGAGACCCCGCTGATCCTGCCGACCGTGGACTACCAGGCCGTG GCCTCGGTGGTCGCCGACTGGACCGGCATTCCAGTGGGGCGCATGGCCCGCAACGAGCTGGAAACCGTGCTCAACCTGGA CCAGCACCTGAAGAAACGCATCATCGGCCAGGACCACGCCCTGCAGATGATCGCCAAGCGCATCCAGACCTCCCGCGCAG GCCTCGACAACCCGAACAAGCCGATTGGCGTGTTCATGCTGGCCGGCACTTCCGGGGTGGGCAAGACCGAAACCGCCCTG GCCCTGGCCGAAGCCATGTATGGCGGTGAGCAGAACGTCATCACCATCAACATGAGCGAGTTCCAGGAAGCCCACACCGT GTCCACCCTCAAGGGCGCCCCGCCGGGCTATGTCGGCTACGGCGAAGGTGGCGTGCTCACCGAAGCGGTACGGCGCAAGC CCTACAGCGTGGTGCTGCTGGACGAAGTGGAAAAGGCCCACCCGGACGTGCACGAGATCTTCTTCCAGGTATTCGACAAG GGCGTCATGGAAGACGGCGAAGGCCGCATGATCGACTTCAAGAACACCCTGATCCTGCTCACCACCAACGCCGGCACCGA GCTGATCGCCAACGTCTGCAAGAACCCGCAGGCGGTGCCCGAGCCGGAGGAAATCGCCAAGGCCCTGCGCCAGCCACTGC TGGAGATCTTCCCGCCGGCACTGCTGGGGCGCCTGGTGACCATTCCCTACTACCCGCTGAGCGACGAGATGCTCAAGGCC ATCACCCGCCTGCAACTGGGGCGGATCAAGAAGCGCGTGGAAAGCACCCACAAGGTGGATTTCGATTTCGACGACGAGGT CATCGACCTGATCGTCTCGCGCTGCACCGAGACCGAAAGCGGCGGGCGGATGATCGACGCCATCCTGACCAACAGCCTGC TGCCGGACATGAGCCGCGAGTTCCTCAACCGCATGCTCGAAGGCCGCGCCCTGGCCGGGGTGCGCATCAGCCAGCGCGAC AACGAACTGCACTACGACTTCAGCGAGCCGGCCTGA Protein sequence : MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLTDSDLHRIIRQFNLEPARLAKDLTEALDRLPR GSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTGYLVIGILKTPSLRHALLGLSREFDKIKVETLCERFDEYIGDSPEN ALSASDGFSAGAVPGEASGAMAPSALGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAG VGKTAVVEGFALRIVVGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQASPKPIILFIDEAHTLVGAGGA AGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPALTRRFQVVQVAEPSEDKALLMMRGVASTMEQHHQVQILDEA LEASVKLSHRYIPARQLPDKSVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELQIIAREQAIGVAIGNRQVNSENL LTAERERLAELESRWAQEKTLVDELLATRAQLRENVGLVDSDVGDDSHGLREKLVDLQQRLSTLQGETPLILPTVDYQAV ASVVADWTGIPVGRMARNELETVLNLDQHLKKRIIGQDHALQMIAKRIQTSRAGLDNPNKPIGVFMLAGTSGVGKTETAL ALAEAMYGGEQNVITINMSEFQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFFQVFDK GVMEDGEGRMIDFKNTLILLTTNAGTELIANVCKNPQAVPEPEEIAKALRQPLLEIFPPALLGRLVTIPYYPLSDEMLKA ITRLQLGRIKKRVESTHKVDFDFDDEVIDLIVSRCTETESGGRMIDAILTNSLLPDMSREFLNRMLEGRALAGVRISQRD NELHYDFSEPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 0.0 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpV | YP_008003284.1 | protein ClpV | VFG2076 | Protein | 0.0 | 87 |
| clpV | YP_008003284.1 | protein ClpV | VFG2084 | Protein | 1e-147 | 44 |
