Gene Information

Name : PFLCHA0_c60500 (PFLCHA0_c60500)
Accession : YP_008003282.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6711020 - 6712879 bp
Length : 1860 bp
Strand : +
Note : -

DNA sequence :
ATGAACCCGCGCCTGCTGGAGCTGTACAACCAGGAACTGCACCACGTGCGCGAAAGCGCCGCGGAGTTCGCCAAGGAATT
CCCGAAGATCGCCAGCCGCCTGACCCTGTCGGGCATGGACTGCGCCGACCCCTATGTCGAGCGCCTGCTGGAGGGCTTCG
CCTACCTGACTGCCCGGGTGCAGCTCAAGCTCGACGCCGAGTACCCGACCTTCACCCACAACCTGCTGGAGATCGCCTAC
CCGCACTACCTGGCACCGACCCCGTCGATGACCGTGGTGCAGTTGCAGGCCGATCCCGACGAAGGTTCCCTGAGCAGCGG
CTTCACCCTGGAGCGCGACACCAGCCTGCGCGCCGCCCTGGGCCGCGATACCCAGACCTGCTGCGAATACCGCACCGCGC
ACTCGGTGACCCTGTGGCCACTGCAAGTGGCCCAGGCCGAATACTTCGGCAACCCGTCGGCAGTGCTCGGGCGCCTGGCC
GCCAGCGAGCCCAGGGCCAAGGCCGGGCTGCGCCTGACCCTGCGCACCGGCGCCGAACTGCCGTTCAACAGCCTGGCCCT
GGACGAGTTGCCGCTGTACCTGAACGGCAATGACGAACAGCCGTTCCGCCTCTACGAACAACTGCTGGGCAACGTCTGCG
CGGTGTTCGCCCGGGCCCCGGGCGGCGACTGGGTCGAGCGCCTGCCCCCGGACGCCCTGCGCTCGCGCGGTTTCGACGAC
CGCGACGCGGCGCTGCCGGTGGTGCCCCAGGCCTTCCAGGGCTACCGCCTGCTGCAGGAATACTTCGCCCTGCCCAACCG
CTTCCTGTTCGTCGAATTCGCCCAGCTGGGGCGCGCGGTCCAGCGCTGCGCCGGCCAGGAGCTGGAGCTGATCGTGCTCT
TCGAGCGCTTCGACCAGAGCCTGGAAGGCAGCGTCGGCACCGCTCAGTTCGTGCCCTTCTGCACCCCGGCGATCAACCTG
TTTCCCAAGCGCCTGGACCGTATCCACCTGTCCGACCGGGTCAACGAGCACCATGTGATCGCCGACCGCACCCGACCGAT
GGATTTCGAGGTCCACTCGCTGACCGCCATCAGCGGCCACGGCACCGGCCCGGAACAGCCGTTCCTGCCGTTCTACGCCG
TGCGCGATCCATCCCGCTACGGCCGCGACCAGTCCTACTACATCGTCCGGCGCGAGCCGCGGGTGCTGTCCAGCGACCAG
CGTCGCAACGGCCCGCGCTCCACCTACATCGGCAGCGAATCCTTCGTCAGCCTGGTGGACAGCCAGCAGGCGCCCTATCG
CCACGACCTGCGCCAGCTCGGGGTCAGCGCGCTGTGCACCAACCGCGACCTGCCACTGTTCATGAACACCGGCAACGGCA
AGACCGACTTCACCCTGGCCGACAGCGCCCCGGTACAGGCCATCCGCTGCCTGGCGGGCCCGAGCCGGCCGCGCCCCAGC
CATGCCCACGACGGCAAGGCCTGGCGCCTGATCAGCCAGCTATCGCTGAACTACCTGTCCCTGAGCGAACAGGGCCAGGG
CGCGGCGGCCCTGCGCGAACTGCTGCGGTTGTACGGCGACAGCAACGACGCGGCCCTGCAGTTGCAGATCGAGGGCCTGC
GGGAAGTCAGCAGCAAGGCGGTGACCCGGCGCCTGCCGATGCCCGGGCCGATCGTCTTCGGCCGGGGCCTGGAGATCACC
CTGGAGTTCGATGAAAACGCGTTCCGCGGCACCGGGGTGTTTCTGCTCGGCGCGGTATTCGAGCGCTTCCTGGCACGTTA
TGTGTCGATCAACAGTTTTACCGAGACGGTGATCCGTACCACCGAACGCGGCGAGATCATGCGATGGAAAGCCAAGCCCG
GACGTCGTCCGACTCTTTGA

Protein sequence :
MNPRLLELYNQELHHVRESAAEFAKEFPKIASRLTLSGMDCADPYVERLLEGFAYLTARVQLKLDAEYPTFTHNLLEIAY
PHYLAPTPSMTVVQLQADPDEGSLSSGFTLERDTSLRAALGRDTQTCCEYRTAHSVTLWPLQVAQAEYFGNPSAVLGRLA
ASEPRAKAGLRLTLRTGAELPFNSLALDELPLYLNGNDEQPFRLYEQLLGNVCAVFARAPGGDWVERLPPDALRSRGFDD
RDAALPVVPQAFQGYRLLQEYFALPNRFLFVEFAQLGRAVQRCAGQELELIVLFERFDQSLEGSVGTAQFVPFCTPAINL
FPKRLDRIHLSDRVNEHHVIADRTRPMDFEVHSLTAISGHGTGPEQPFLPFYAVRDPSRYGRDQSYYIVRREPRVLSSDQ
RRNGPRSTYIGSESFVSLVDSQQAPYRHDLRQLGVSALCTNRDLPLFMNTGNGKTDFTLADSAPVQAIRCLAGPSRPRPS
HAHDGKAWRLISQLSLNYLSLSEQGQGAAALRELLRLYGDSNDAALQLQIEGLREVSSKAVTRRLPMPGPIVFGRGLEIT
LEFDENAFRGTGVFLLGAVFERFLARYVSINSFTETVIRTTERGEIMRWKAKPGRRPTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0289 NP_454871.1 hypothetical protein Not tested SPI-6 Protein 5e-116 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PFLCHA0_c60500 YP_008003282.1 hypothetical protein VFG2074 Protein 0.0 82