Gene Information

Name : hcp (PFLCHA0_c60480)
Accession : YP_008003280.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Virulence
Product : protein Hcp
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6709859 - 6710347 bp
Length : 489 bp
Strand : +
Note : -

DNA sequence :

ATGGCTGTTGATATTTTCATCAAGATCGGTGACATCAAGGGCGAGTCCATGGACAAAGCCCACAAGGACGAAATCGACGT
GTTGAACTGGAGCTGGGGCATGTCCCAGTCCGGCAACATGCACGTTGGCGGTGGCGGCGGCGCGGGCAAGGTGAACATCC
AGGACCTGTCGCTGACCAAGTACGTGGACAAGGCATCGCCGAACCTGATGATGCATTGCTCCAGCGGCAAGCACATCGAC
AAGGTGCGCCTGACCGTGCGCAAGGCCGGCGGCGAAAGCCAGGTCGAGTACATGATCATCGACCTGGAAGAAGTGCTGAT
CACTTCGCTGAGCACCGGCGGTTCGGGCAGCGATGACCGCCTGACCGAAAACATCACCCTGAACTTCGCTCAGGTGATGG
TCGAGTACCAGCCGCAGAAAGCCGACGGCACCAAGGACGGCGGCCCGATCAAGTACGGCTGGAACATCCGCTCCAACACC
AAGCGCTGA

Protein sequence :

MAVDIFIKIGDIKGESMDKAHKDEIDVLNWSWGMSQSGNMHVGGGGGAGKVNIQDLSLTKYVDKASPNLMMHCSSGKHID
KVRLTVRKAGGESQVEYMIIDLEEVLITSLSTGGSGSDDRLTENITLNFAQVMVEYQPQKADGTKDGGPIKYGWNIRSNT
KR

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY0302	NP_454882.1	conserved hypothetical protein	Not tested	SPI-6	Protein	3e-25	43

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
hcp	YP_008003280.1	protein Hcp	VFG2071	Protein	1e-45	77