Gene Information

Name : PFLCHA0_c60100 (PFLCHA0_c60100)
Accession : YP_008003242.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6666831 - 6667505 bp
Length : 675 bp
Strand : -
Note : -

DNA sequence :
ATGAGTATTCGTGACTGGCCCGCGGCGGAGCGTCCGCGGGAACGGCTTCTGGAGCAGGGCGCCATCAGCCTTTCCGACGC
CGAGCTACTGGCTATTTTCCTGCGCACCGGGGTGGCCGGTAAAAGCGCGGTGGACCTGGCGCGGCATCTGTTGCGGCGCT
TTGGCAGCCTGCGCAGGCTGCTGGAGGCCGATCAACTGACCTTCACCCGCCAACTGGGGCTGGGCCCGGCCAAGTACGCC
TTGTTGCAGGCGGTGCTGGAAATGGCCCGACGGCATCTGGCGGAGAAACTGCATCGCCAGTCCGCGTTGGAGAACCCGCT
GGTGGTGCGCGATTACCTGAAGTCGATGCTGCGCCACGAGCCCCATGAAGTGTTCGGTTGCCTGTTTCTCGACACGCGGC
ATCGTGTACTGACCTTCGAAGTGCTGTTTCAGGGCTCCATCGACAGCACCACGGTGTACCCGCGGCAGGTGATCAAGCGC
GCCCTGGCGCACAATGCAGCGGCGGTGATCCTCTGCCACAACCACCCGTCAGGCATTTGCGAGCCCAGCCCGGCCGACCG
GGTAGTGACCCGACGTTTGCAGGAGGCACTGGAGTTGATCGATGTGCGGGTGCTGGACCACTTCATCGTGGGGGAGGGCG
ACCCGCTGTCGATGGCCGAGTACGGCTGGATCTGA

Protein sequence :
MSIRDWPAAERPRERLLEQGAISLSDAELLAIFLRTGVAGKSAVDLARHLLRRFGSLRRLLEADQLTFTRQLGLGPAKYA
LLQAVLEMARRHLAEKLHRQSALENPLVVRDYLKSMLRHEPHEVFGCLFLDTRHRVLTFEVLFQGSIDSTTVYPRQVIKR
ALAHNAAAVILCHNHPSGICEPSPADRVVTRRLQEALELIDVRVLDHFIVGEGDPLSMAEYGWI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeS YP_854323.1 radC-like protein YeeS Not tested PAI I APEC-O1 Protein 1e-21 44
c5152 NP_757000.1 radC-like protein yeeS Not tested PAI II CFT073 Protein 1e-21 44
yeeS AAZ04458.1 putative RadC-like protein Not tested PAI I APEC-O1 Protein 7e-22 44
Z1217 NP_286752.1 RadC family DNA repair protein Not tested TAI Protein 8e-21 43
yeeS CAI43901.1 YeeS protein Not tested LEE Protein 7e-21 43
unnamed AAL08475.1 unknown Not tested SRL Protein 4e-21 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PFLCHA0_c60100 YP_008003242.1 hypothetical protein VFG1066 Protein 2e-21 43