Gene Information

Name : hemC (PFLCHA0_c59610)
Accession : YP_008003193.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase HemC
Function : -
COG functional category : -
COG ID : -
EC number : 2.5.1.61
Position : 6615744 - 6616685 bp
Length : 942 bp
Strand : -
Note : -

DNA sequence :
ATGTCCTCTCGCGAAATCCGCATCGCTACCCGCAAAAGTGCTCTGGCCTTGTGGCAGGCCGAATACGTCAAAGCCCGTCT
GCAAGAGGCCCATCCGGGTCTTGTCGTGACCCTGGTGCCCATGGTCAGCCGCGGCGACAAACTATTGGACTCGCCCTTGT
CGAAAATCGGTGGCAAGGGTCTGTTCGTCAAGGAACTGGAAACCGCGCTGCTGGAAAACCAGGCTGATATCGCCGTGCAC
TCGATGAAAGATGTGCCCATGGACTTCCCCGAAGGCCTGGGTCTGTTCTGCATCTGCGAGCGCGAAGACCCGCGTGATGC
CTTTGTTTCCAACACCTACGCCAGCCTCGACGAGTTGCCTGAAGGCAGCGTGGTGGGCACCTCCAGCCTGCGCCGTCAGG
CTCAGTTACTGACCCGTCGCCCCGACCTGCAGATCCGTTTTCTGCGGGGCAACGTCAATACCCGTCTGGCCAAGCTGGAC
GCTGGCGAATACGACGCCATCATCCTCGCGGCCGCTGGCTTGATCCGCCTCGGATTCGAGGATCGCATCAGCTCCTCCAT
CAGTGTCGACGACAGCCTGCCCGCCGGTGGCCAGGGCGCCGTCGGCATCGAGTGCCGCAGTGCCGACATTGAAATCCACG
CCTTGCTGGCCCCCCTGCATCACGCCGACACGGCCAGCCGGGTAACCGCCGAGCGCGCACTGAACAAGCACCTCAACGGT
GGTTGCCAGGTGCCAATTGCCTGCTATGCGGTGCTGGAAGGCGAGCAGATCTGGCTGCGCGGCCTGGTGGGCGAGCCTAG
CGGCGGCCTGCTGCTCAGCGCCGAAGCTCGTGGCCCTCGCGCATCGGCCGCCGAGCTGGGTGTGCAAGTGGCGGATGCCC
TGCTGGCCCAGGGCGCCGATGACATTCTGCGCGCGGTCTACGGCGAGGCGGGCGAGGAGTGA

Protein sequence :
MSSREIRIATRKSALALWQAEYVKARLQEAHPGLVVTLVPMVSRGDKLLDSPLSKIGGKGLFVKELETALLENQADIAVH
SMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYASLDELPEGSVVGTSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLD
AGEYDAIILAAAGLIRLGFEDRISSSISVDDSLPAGGQGAVGIECRSADIEIHALLAPLHHADTASRVTAERALNKHLNG
GCQVPIACYAVLEGEQIWLRGLVGEPSGGLLLSAEARGPRASAAELGVQVADALLAQGADDILRAVYGEAGEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 3e-75 61
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 3e-75 61