Gene Information

Name : zntR (PFLCHA0_c58470)
Accession : YP_008003079.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Resistance
Product : HTH-type transcriptional regulator ZntR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6497528 - 6497977 bp
Length : 450 bp
Strand : +
Note : -

DNA sequence : 
ATGAAGATTGGCGAACTGGCGAAACTCACCGACTGTCAGGTCGAGACCATCCGTTACTACGAGCGCGAAGGGCTGCTGCC
GGAACCGGCCCGCAGTGAAGGCAACTATCGCCTCTACACCCAGGCCCACACCGAGCGCCTGACCTTTATCCGCAATTGCC
GCAGCCTGGACATGACCCTCGAGGAGATCCGCAGCCTGCTCAACCTGCGCGACAGCCCCCAGGACCAGTGCGCCAGCGTC
AACGCCCTCATCGACGAGCATATCCATCACGTCAAGGCGCGCATCGACGGCCTGCTGGCCCTGCAGGAACAACTGCTGGA
CCTGCGCCAGCGCTGCAGCGAGGGCCCGGACCTTGAGCACTGCGGAATTCTCCAGCGCCTGGAAGTCAGCGGCTCGGTGG
CCCCCAATGAGAGCGAGCCCTCCCATGTCGGGCGCAGCCACGGGCACTGA

Protein sequence : 
MKIGELAKLTDCQVETIRYYEREGLLPEPARSEGNYRLYTQAHTERLTFIRNCRSLDMTLEEIRSLLNLRDSPQDQCASV
NALIDEHIHHVKARIDGLLALQEQLLDLRQRCSEGPDLEHCGILQRLEVSGSVAPNESEPSHVGRSHGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 2e-30 56
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 9e-29 51
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 8e-29 51
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 6e-29 51
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 6e-29 51
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 1e-28 50
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 2e-28 50
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 1e-28 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
zntR YP_008003079.1 HTH-type transcriptional regulator ZntR BAC0058 Protein 5e-46 77
zntR YP_008003079.1 HTH-type transcriptional regulator ZntR BAC0301 Protein 6e-33 57