Gene Information

Name : cadA (PFLCHA0_c58460)
Accession : YP_008003078.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Resistance
Product : putative cadmium-transporting ATPase CadA
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.3
Position : 6495088 - 6497439 bp
Length : 2352 bp
Strand : -
Note : -

DNA sequence :
ATGAGCGATTCTCTCCACAGCCCGCGCAAAACCGCGGATCAGCAGCCCCAGGCTGATCACGATCACGATCACGATCACGA
TCACGATCACGATCACGATCACAGCCATGGCCACAGCCATTCCCATGCGCCCGCGGGCAAGTTGCAGCCGGTCAAGGCAC
ACGATCATGCCGCCCGCGGCGCATCCTGCTGCGGTTCCGCCGACCTGGCGCCGTCCAGGGTCACCCTGAGCGAGACCCCG
ACCGCCGGCGCGCGCTTGAGCAGCTTTCGCATCGAAGCCATGGACTGCCCCACCGAACAGACCCTGATCCAGAACAAGCT
GGGCAAGCTGGCCGGGGTCCAGGCGCTGGAGTTCAACCTGATGAACCGCGTGCTGGGGGTGACCCACGACCTGCCGAGCA
CCGCGCCTATCATCGAGGCGGTCAAGTCACTGGGCATGCACGCCGAACCGCTGGAACAGGAGGGTGACCAAGCCGCGCCT
GCCGCAGCGCCCGTGAAGAAGCCCTGGTGGCCGCTGGCCCTGTCCGGTATCGGCGCGCTGGCTGCCGAGGTCATCCATTT
CACCAATGCCGCGCCCGACTGGGTGATTGCCCTGGTGGCCCTGGTGTCGATCCTCAGTGGTGGCCTGACCACCTACAAGA
AGGGCTGGATCGCCCTGAAGAACCGCAACCTCAACATCAATGCCCTGATGAGCATCGCCGTGACCGGCGCCGTGCTGATC
GGCCAATGGCCGGAAGCGGCGATGGTGATGTTCCTGTTCACCGTGGCGGAATTGATCGAGGCCCGTTCCCTGGATCGGGC
GCGCAACGCCATCAGCGGCCTGATGCAGATGACCCCGGAACGGGTCACGGTGCAGCAGGCAGACGGCAACTGGAGCGAAC
AGGAAGCGAAAAACGTCGAACTTGGCGCACTGGTGCGGGTGCGTCCCGGCGAGCGCATCGGCCTCGACGGCGAGGTCGTG
TCCGGCAACTCCACCATCGACCAGGCGCCGATCACCGGTGAAAGCCTGCCGGTGGAAAAGACTGTGGGCGACAAGGTTTT
CGCCGGCACCATCAACCAGGCCGGCTCCCTGGAATACCGAGTGACTGCCGCCGCCAACAACTCGACCCTGGCGCGGATCA
TCCACGCTGTGGAACAGGCCCAGGGCGCCCGGGCTCCGACCCAGCGCTTCGTTGACAGCTTCTCGAAAATCTACACCCCG
GCGGTATTCGCCTTCGCCCTGGCGGTGGCGCTGATTCCGCCGCTGTTCATGGGCGGCGTCTGGTTCGACTGGATCTACCG
CGCCCTGGTGCTGCTGGTAGTGGCTTGCCCCTGCGCCCTGGTGATCTCCACCCCGGTGAGCATTGTCAGCGGCCTGGCGG
CTGCCGCGCGCAAGGGCATCCTGGTCAAGGGCGGGGTCTACCTGGAAGGCGGCTACAAGCTCGACTACCTGGCCCTGGAC
AAGACCGGCACCATCACCCACGGCAAACCGGTGCAGACCGACTTCCTGTCCCTGGACCCGCTGGCCCAGGACACCGCCCC
GGCCCTGGCCGCAAGCCTGGCAGGGCGTTCCGACCACCCGGTGTCCCTGGCCATTGCCCAGGCGGCTGTGGATAAGCAGT
TGGCCATGCACCCTGTGGATAACTTCGAGGCCCTGACCGGCCGAGGCGTACGCGGCGAGATCAACGGCGAGCTGTACCAC
CTGGGCAACCATCGTCTGGTGGAAGAGCTGGGCCTGTGCTCCCCGGCTTTGGAAGAAAAACTCTTCGCCCTGGAGAAACA
GGGCAAGACCGTGGTCCTGCTGCTGGACCGCAATGGCCCGCTGGCGCTGTTCGCCGTGGCCGATACGGTGAAGGAATCCA
GCCGCGAAGCCATCCAGCAATTGCATGAGCTGGGGATCAAGACCCTGATGCTCACCGGCGACAACCCCCATACCGCCCAG
GCCATCGCGGCCCAGGTGGGTATCGACCAGGCCCGGGGCGACCTGCTGCCCACCGACAAGCTGCAGGCCATCGAAGACCT
GTACGCCCAGGGCCATCGGGTGGGCATGGTGGGCGACGGCATCAACGACGCCCCGGCCCTGGCCCGTGCCGAAATCGGTT
TCGCCATGGCTGCGGCGGGCACCGACACCGCCATCGAGACCGCGGATGTGGCCCTGATGGACGATGATCTGCGCAAGATC
CCGGCGTTTATCCGCCTGTCGCGCCAGACCTCGGTGGTGCTCAAGCAAAATATCGTCCTGGCCCTGGTCATCAAGGCGAT
CTTTCTTGGGGTAACCTTTGCCGGGCTGGCCACCATGTGGATGGCAGTGTTCGCCGACATGGGCGTGAGCCTGTTGGTGG
TGTTCAACGGTCTGCGCCTGCTGCGCAAATAA

Protein sequence :
MSDSLHSPRKTADQQPQADHDHDHDHDHDHDHDHSHGHSHSHAPAGKLQPVKAHDHAARGASCCGSADLAPSRVTLSETP
TAGARLSSFRIEAMDCPTEQTLIQNKLGKLAGVQALEFNLMNRVLGVTHDLPSTAPIIEAVKSLGMHAEPLEQEGDQAAP
AAAPVKKPWWPLALSGIGALAAEVIHFTNAAPDWVIALVALVSILSGGLTTYKKGWIALKNRNLNINALMSIAVTGAVLI
GQWPEAAMVMFLFTVAELIEARSLDRARNAISGLMQMTPERVTVQQADGNWSEQEAKNVELGALVRVRPGERIGLDGEVV
SGNSTIDQAPITGESLPVEKTVGDKVFAGTINQAGSLEYRVTAAANNSTLARIIHAVEQAQGARAPTQRFVDSFSKIYTP
AVFAFALAVALIPPLFMGGVWFDWIYRALVLLVVACPCALVISTPVSIVSGLAAAARKGILVKGGVYLEGGYKLDYLALD
KTGTITHGKPVQTDFLSLDPLAQDTAPALAASLAGRSDHPVSLAIAQAAVDKQLAMHPVDNFEALTGRGVRGEINGELYH
LGNHRLVEELGLCSPALEEKLFALEKQGKTVVLLLDRNGPLALFAVADTVKESSREAIQQLHELGIKTLMLTGDNPHTAQ
AIAAQVGIDQARGDLLPTDKLQAIEDLYAQGHRVGMVGDGINDAPALARAEIGFAMAAAGTDTAIETADVALMDDDLRKI
PAFIRLSRQTSVVLKQNIVLALVIKAIFLGVTFAGLATMWMAVFADMGVSLLVVFNGLRLLRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C97 AAN62190.1 putative metal-transporting P-type ATPase Not tested PAGI-2(C) Protein 0.0 68
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 4e-113 46
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 3e-112 46
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 2e-112 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadA YP_008003078.1 putative cadmium-transporting ATPase CadA BAC0298 Protein 0.0 68