Gene Information

Name : ribD2 (PFLCHA0_c54740)
Accession : YP_008002716.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.4.26
Position : 6097545 - 6098678 bp
Length : 1134 bp
Strand : -
Note : -

DNA sequence :
ATGAGCCAGCCTGCCGAGCAAGCGGTCCTCGACGCCCACTACATGGCCCGTGCTCTGGAACTGGCGCGCAAGGGTCGCTA
CTCCACCCATCCCAACCCGCGTGTCGGCTGCGTCATCGTGCGCGACGGCCAGGTGGTGGGCGAGGGCTGGCACGTGCGGG
CCGGCGAGCCCCATGCCGAGGTGCATGCCCTGCGCGCGGCCGGTGAACTGGCCCGTGGCGCCACCGCCTATGTGACCCTC
GAACCCTGCAGCCATCACGGGCGTACGCCGCCCTGCGCCGACGCCCTGGTGAATGCCGGTGTGGCACGGGTGGTCGCGGC
CATGCAGGACCCCAACCCGGAAGTGGCCGGCCGTGGCTTGCATCGCCTGGCCCAGGCCGGCATCGACACCCATGGCGGTG
TGCTGGAAGGCGAGGCGCGGGCGATCAATAAAGGCTTTCTGAAACGCATGGAGCACGGCTTGCCTTATGTGCGGGTCAAG
CTGGCCATGAGCCTGGATGGCCGCACCGCCATGGCCAGTGGCGAGAGCCAGTGGATCACTGGCCCTGCGGCGCGCTCTGC
AGTGCAGCGCCTGCGGGCCGAGTCCAGCGTGGTACTGACCGGCGCCGACACAGTGCTGGCGGACGACGCGCGGCTGACCG
TGCGCGCCGCCGAACTGGGCCTGGATGCCGAGCAGACCGCCCTGGCCATGAGCCGGCCGCCGCTGCGGGTGCTGATCGAC
GGCCGCCTGCGGGTGCCTCTGGATGCGCCATTCTTCAAGGCCGGCCCAGCGTTGGTTGCCACTTGTGCGGCGGTGGAAGA
GCAATACGCCAACGGCCCGGAATGCCTGATTGTTCCAGGCCCCGATGGCCAGGTGGATCTGCGTCGCCTGCTGTTGGAGC
TGGCGGCCCGTGGGGTCAACGAAGTGCTGGTGGAAGCCGGCCCACGCCTGGCCGGGGCCTTTGCCCAGCAGGGCCTGGTG
GACGAGTACCAGATATTCGTCGCCGGCAAGTTCCTCGGTTCCTCTGCGCGGCCGTTGCTGGACTGGCCGCTGGCGCAGAT
GAGCCAGGCGCCATTGCTGAAGATCATAGAAATGCGTGCGGTGGGCGATGACTGGCGAGTCACTGCCATCCCGGCCCCGC
CAGCGAGCGTATAA

Protein sequence :
MSQPAEQAVLDAHYMARALELARKGRYSTHPNPRVGCVIVRDGQVVGEGWHVRAGEPHAEVHALRAAGELARGATAYVTL
EPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLHRLAQAGIDTHGGVLEGEARAINKGFLKRMEHGLPYVRVK
LAMSLDGRTAMASGESQWITGPAARSAVQRLRAESSVVLTGADTVLADDARLTVRAAELGLDAEQTALAMSRPPLRVLID
GRLRVPLDAPFFKAGPALVATCAAVEEQYANGPECLIVPGPDGQVDLRRLLLELAARGVNEVLVEAGPRLAGAFAQQGLV
DEYQIFVAGKFLGSSARPLLDWPLAQMSQAPLLKIIEMRAVGDDWRVTAIPAPPASV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 1e-57 49
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 1e-57 49