Gene Information

Name : aldA2 (PFLCHA0_c54390)
Accession : YP_008002681.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase AldA
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.3
Position : 6057678 - 6059198 bp
Length : 1521 bp
Strand : +
Note : -

DNA sequence :
ATGCGTTACGCACACCCCGGTACTGAAGGCGCTATCGTTTCGTTCAAGAGCAAGTACGGTAACTACATCGGCGGCGAATT
CGTCGCGCCTGTCAAAGGCCAGTACTTCACCAACACCTCGCCGGTCAACGGCCAGCCAATTGCCGAATTCCCCCGCTCCA
CCGCCGAAGACATCGACAAGGCGCTGGACGCTGCCCACGCCGCCGCCGACGCCTGGGGCGCCACCTCGGTGCAGGCGCGC
TCGCTGATCCTGCTGAAGATTGCCGACCGCATCGAACAGAACCTCGAACTGCTGGCCATCACCGAAACCTGGGACAACGG
CAAGGCCGTGCGCGAAACCCTGAACGCCGACATTCCCCTGGCCGCCGACCACTTCCGCTACTTCGCCGGTTGCCTGCGGG
CCCAGGAAGGCAGCGCTGCGGAAATCGACGGCAACACCGTGGCCTATCACATCCATGAACCCCTGGGCGTGGTCGGGCAG
ATCATCCCGTGGAACTTCCCGATCCTGATGGCCGCCTGGAAACTCGCCCCGGCCCTGGCAGCGGGCAACTGCGTGGTACT
CAAGCCCGCCGAGCAGACCCCGCTGGGCATCACCGTGCTCATGGAAGTGATCGGCGACCTGCTGCCACCCGGCGTACTCA
ACGTGGTGCAAGGTTTTGGCCGCGAAGCCGGCGAAGCCCTGGCCACCAGCAAGCGCATCGCCAAGATCGCCTTCACCGGC
TCGACTCCGGTGGGCTCGCACATCATGAAGTGCGCCGCCGAGAACATCATTCCGTCCACCGTGGAACTGGGCGGCAAGTC
GCCGAACATCTTCTTCGAAGACATCATGCAGGCCGAGCCCAAGTTCATCGAAAAGGCCGCCGAAGGCCTGGTGCTGGCAT
TCTTCAACCAGGGTGAAGTCTGCACCTGCCCATCCCGCGCCCTGGTGCAGGAATCGATCTACGACGAATTCATGCAAGTG
GTGATGAAGAAGATCGAGCAGATCAAGCGTGGCGACCCACTGGACACCGACACCATGGTCGGCGCCCAGGCTTCCGAGCA
GCAGTTCGACAAGATCCTCTCCTACCTCGACATCGCCAAGAACGAAGGTGCGCAGCTGCTCACCGGCGGCAAGGTGGAAA
AACTCGAGGGCGACCTGTCCAGCGGCTACTACATCCAGCCGACCCTGCTCAAGGGCACCAACAAGATGCGCGTGTTCCAG
GAGGAAATCTTCGGCCCGGTGGTCAGCGTCACCACCTTCAAGGACGAAGCCGAAGCCCTGGCGATCGCCAACGACACCGA
GTTCGGCCTGGGTGCCGGGGTCTGGACCCGCGACATCAACCGCGCCTACCGCATGGGCCGCGGGATCAAGGCCGGCCGCG
TCTGGACCAACTGCTACCACCTGTACCCGGCCCACGCCGCGTTCGGTGGCTACAAGAAATCCGGCGTCGGCCGTGAAACC
CACAAGATGATGCTCGACCACTACCAGCAGACCAAGAACCTGCTGGTGAGCTACGACATCAACCCGCTGGGCTTCTTCTG
A

Protein sequence :
MRYAHPGTEGAIVSFKSKYGNYIGGEFVAPVKGQYFTNTSPVNGQPIAEFPRSTAEDIDKALDAAHAAADAWGATSVQAR
SLILLKIADRIEQNLELLAITETWDNGKAVRETLNADIPLAADHFRYFAGCLRAQEGSAAEIDGNTVAYHIHEPLGVVGQ
IIPWNFPILMAAWKLAPALAAGNCVVLKPAEQTPLGITVLMEVIGDLLPPGVLNVVQGFGREAGEALATSKRIAKIAFTG
STPVGSHIMKCAAENIIPSTVELGGKSPNIFFEDIMQAEPKFIEKAAEGLVLAFFNQGEVCTCPSRALVQESIYDEFMQV
VMKKIEQIKRGDPLDTDTMVGAQASEQQFDKILSYLDIAKNEGAQLLTGGKVEKLEGDLSSGYYIQPTLLKGTNKMRVFQ
EEIFGPVVSVTTFKDEAEALAIANDTEFGLGAGVWTRDINRAYRMGRGIKAGRVWTNCYHLYPAHAAFGGYKKSGVGRET
HKMMLDHYQQTKNLLVSYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-148 66
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 6e-156 65
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 6e-156 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 6e-156 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-155 65
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 6e-54 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldA2 YP_008002681.1 aldehyde dehydrogenase AldA VFG0082 Protein 2e-148 66