Gene Information

Name : pykA (PFLCHA0_c47770)
Accession : YP_008002031.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Virulence
Product : pyruvate kinase II
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.1.40
Position : 5373908 - 5375359 bp
Length : 1452 bp
Strand : +
Note : -

DNA sequence :
ATGTCCGTTCGTCGTACCAAAATCGTTGCCACCCTTGGCCCGGCCAGTAACTCGCCGGAAGTTCTCGAACAGCTGATTCT
CGCGGGCCTGGATGTTGCCCGTCTGAACTTCTCCCACGGCACTCCGGACGAGCACAAGGCTCGCGCCAAACTGGTCCGCG
ACCTGGCAGCCAAGCACGGCCGCTTCGTGGCCATCCTCGGCGACCTGCAGGGCCCGAAGATCCGCATCGCCAAATTCGCC
AACAAGCGCATCGAGCTGAAGATCGGTGACAAGTTCACCTTCTCCACCAGCCATCCGCTGACCGAAGGCACCCAGGATAT
CGTCGGCATCGACTACCCGGATCTGGTCAAGGACTGCGGTGTGGGCGACGAGCTGCTGCTGGACGACGGCCGCGTGGTGA
TGCGTGTGGAAACCGCCACCGCCACCGAATTGCATTGCGTGGTGACCATCGGCGGCCCGCTGTCCGACCACAAGGGCATC
AACCGTCGTGGTGGTGGCCTGACCGCTCCGGCCCTGACCGAGAAAGACAAGGCCGATATCAAGCTCGCGGCCGAGATGGA
AGTCGATTACCTGGCCGTGTCCTTCCCACGGGACGCCGCCGACATGGAATACGCGCGCAAGCTGCGTGACGAAGCCGGTG
GTACTGCCTGGCTGGTAGCGAAGATCGAACGCGCCGAAGCGGTGGCCGACGACGAAACCCTCGACGGCCTGATCAAGGCC
AGCGACGCGGTCATGGTTGCCCGTGGCGACCTGGGCGTGGAAATCGGCGACGCCGAGCTGGTGGGCATCCAGAAGAAAAT
CATTCTGCACGCCCGTCGCCACAACAAGGCGGTGATCGTTGCGACCCAGATGATGGAGTCGATGATCCAGAACCCGATGC
CGACCCGCGCCGAAGTGTCCGACGTGGCCAACGCCGTGCTCGACTACACCGATGCGGTGATGCTCTCGGCGGAAAGCGCC
GCCGGTGCCTACCCGCTGGAAGCGGTGCAGGCCATGGCGCGGATCTGCGTCGGTGCGGAAAAGCACCCCACCAGCAAGAC
CTCCAGCCACCGCATGGGCAAGGTGTTCGAAAGCTGCGACCAGAGCATCGCCCTGGCTGCCATGTACACCGCCAACCACT
TCCCGGGCGTGAAGGCGATCATCGCCCTGACCGAAAGTGGCTACACCCCGCTGATCATGTCGCGCATCCGCTCCTCGGTG
CCGATCTACGCCTACTCCCCGCACCGCGAAACCCAGGCTCGCGCAGCCATGTTCCGTGGCGTCTACACCATCCCGTTCGA
CCCGGCTTCCCTGCCGCCCGAGCAGGTCAGCCAGGCAGCGATCGATGAGCTGCTCAAGCGCGGTGTCGTAGAGAAAGGCG
ACTGGGTGATTCTCACCAAGGGCGACAGCTACCACACCACCGGCGGCACCAACGGCATGAAGATCCTGCACGTGGGCGAC
CCGATGGTCTGA

Protein sequence :
MSVRRTKIVATLGPASNSPEVLEQLILAGLDVARLNFSHGTPDEHKARAKLVRDLAAKHGRFVAILGDLQGPKIRIAKFA
NKRIELKIGDKFTFSTSHPLTEGTQDIVGIDYPDLVKDCGVGDELLLDDGRVVMRVETATATELHCVVTIGGPLSDHKGI
NRRGGGLTAPALTEKDKADIKLAAEMEVDYLAVSFPRDAADMEYARKLRDEAGGTAWLVAKIERAEAVADDETLDGLIKA
SDAVMVARGDLGVEIGDAELVGIQKKIILHARRHNKAVIVATQMMESMIQNPMPTRAEVSDVANAVLDYTDAVMLSAESA
AGAYPLEAVQAMARICVGAEKHPTSKTSSHRMGKVFESCDQSIALAAMYTANHFPGVKAIIALTESGYTPLIMSRIRSSV
PIYAYSPHRETQARAAMFRGVYTIPFDPASLPPEQVSQAAIDELLKRGVVEKGDWVILTKGDSYHTTGGTNGMKILHVGD
PMV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 2e-77 46
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-59 45
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 4e-60 45
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 3e-60 45
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 3e-60 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pykA YP_008002031.1 pyruvate kinase II VFG0479 Protein 1e-60 45