Gene Information

Name : kdpE2 (PFLCHA0_c46400)
Accession : YP_008001895.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Virulence
Product : KDP operon transcriptional regulatory protein KdpE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5229354 - 5230046 bp
Length : 693 bp
Strand : -
Note : -

DNA sequence :
ATGAGCAGCGCACGCATCCTGATCGTCGAGGACGAAGCCAATATCCGCCGTTTCGTCGGTATCGCCCTGGAGGACGAAGG
TTTCCAGGTGTTCGAGGCCGACAGCGTCAAGCGCGCCCTGATCCATGCCGCCAGCCGCCAGCCGGACCTGGTGATCGTCG
ACCTGGGCCTGCCGGACGGCGACGGCAAGCAGTTGATCAGCGAGCTGCGCGGCTGGCTGGCGGTGCCGATCCTGGTGCTG
TCGGCCCGGGATCGGGAGGACGAGAAAGTCGCCGCCCTGGATGCCGGCGCCGACGACTACCTGGTCAAGCCGTTCGGCGT
GCCGGAACTGCTGGCGCGGATTCGCGCGCAACTGCGCCGTCATGGCCAGAGCGGTACGGCGGCCGCCACCAGCAAGGTGG
CCTTTGGTGCCATCGAGGTCGACCTGGCCACCCATGAGGTGCGCCGCGAAGGGCTGCCTGTGCACCTCACGCCGATCGAG
TACCGTCTGCTCTGCGCGCTGATCCGTGGCCAGAGCCGGGTGCTGACCCATCGCCAGTTGCTGCTGGAAGTCTGGGGCCT
GGACTACGTCGACCGCGCCCATTACCTGCGGGTGCACATGGCCCATCTGCGGCAGAAGCTGGAGGCCGATCCGGCCCAGC
CCCAGCATCTGATCACCGAGTTGCAGGTGGGTTACCGCCTGGTGGGGCTGTGA

Protein sequence :
MSSARILIVEDEANIRRFVGIALEDEGFQVFEADSVKRALIHAASRQPDLVIVDLGLPDGDGKQLISELRGWLAVPILVL
SARDREDEKVAALDAGADDYLVKPFGVPELLARIRAQLRRHGQSGTAAATSKVAFGAIEVDLATHEVRREGLPVHLTPIE
YRLLCALIRGQSRVLTHRQLLLEVWGLDYVDRAHYLRVHMAHLRQKLEADPAQPQHLITELQVGYRLVGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 2e-40 42
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 3e-40 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kdpE2 YP_008001895.1 KDP operon transcriptional regulatory protein KdpE VFG1390 Protein 2e-29 43
kdpE2 YP_008001895.1 KDP operon transcriptional regulatory protein KdpE VFG1389 Protein 6e-29 41