Gene Information

Name : ddh (PFLCHA0_c45250)
Accession : YP_008001784.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Resistance
Product : 2-hydroxyacid dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.1.1.-
Position : 5115140 - 5116159 bp
Length : 1020 bp
Strand : +
Note : -

DNA sequence : 
ATGCTGGGCGCCCCGAACAAGGATGCAGCCATGCGTACGATTCTTTTCAGCAGCCAGAACTACGACCGCGAGAGTTTCCT
CGGCGCTCAACGGCCAGCAGGCATCGAACTGCAATTCCAGGCCGCACGCCTGAGCCTGGATACCGCCGCCCTGGCTGAAC
GCCATGAAGTGGTCTGTGCCTTTATCAACGACGACCTCAGTGCCCCGGTACTGGAACAGCTGGCTGCCGGTGGCACCCGC
CTGATCGCTCTGCGCTCGGCCGGTTACAACCACGTCGACCTGAGCGCGGCCCAGCGCCTGGGGCTGGATGTGGTGCGGGT
CCCGGCCTATTCCCCCCATGCGGTCGCCGAACATGCCGTGGCCCTGATCCTGGCGCTCAACCGCCGCCTGCACCGGGCCT
ACAACCGCACTCGCGAAGGCGACTTCACCCTGCACGGCCTGACCGGCTTCGACCTGGTGGGCAAGACCGTGGGCATTGTC
GGCACCGGCCAGATCGGCGCCACCTTCGCCCGGATCATGGCCGGCTTCGGCTGCCAGCTGCTGGCGTACGACCCCTTCCC
CAATCCCGCTGTAGAAGCCCTCGGTGCCCGTTACCTGGACCTGCCCGAGCTGCTGGCCCAGTCGCAGATCATCAGCCTGC
ACTGCCCGTTGACCGAGGACAGTCGTTACCTGATCAACCAGCAGAGCCTGGCCCACATGCAACCGGGAGCAATGCTGATC
AACACCGGGCGTGGCGGCCTGGTGGACACCCCGGCGCTGATCGAGGCGCTCAAGAGCGGCCAACTGGGCTACCTGGGGCT
GGATGTCTATGAAGAAGAGGCGCAACTGTTCTTCGAGGACCGCTCCGATCTACCCCTGCAGGATGACGTGCTGGCGCGGC
TGCTGACCTTTCCCAACGTGATAGTCACTGCGCACCAGGCGTTCCTGACCCGCGAAGCCCTGGCGGCCATCGCCGAGACC
ACCTTGCACAACATCGCCAGCTGGGCAGCTGGCCAGCCGCAGAACCGGGTCCACGGCTGA

Protein sequence : 
MLGAPNKDAAMRTILFSSQNYDRESFLGAQRPAGIELQFQAARLSLDTAALAERHEVVCAFINDDLSAPVLEQLAAGGTR
LIALRSAGYNHVDLSAAQRLGLDVVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTREGDFTLHGLTGFDLVGKTVGIV
GTGQIGATFARIMAGFGCQLLAYDPFPNPAVEALGARYLDLPELLAQSQIISLHCPLTEDSRYLINQQSLAHMQPGAMLI
NTGRGGLVDTPALIEALKSGQLGYLGLDVYEEEAQLFFEDRSDLPLQDDVLARLLTFPNVIVTAHQAFLTREALAAIAET
TLHNIASWAAGQPQNRVHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanHB YP_008394258.1 VanH protein, D-specific alpha-keto acid dehydrogenase Not tested Not named Protein 2e-43 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ddh YP_008001784.1 2-hydroxyacid dehydrogenase AF310956.2.orf4.gene Protein 4e-44 42