Gene Information

Name : qseB3 (PFLCHA0_c42420)
Accession : YP_008001505.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein QseB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4795560 - 4796237 bp
Length : 678 bp
Strand : -
Note : -

DNA sequence : 
ATGCACGTACTTGTCTGTGAAGATGATGAGCTGATTGCCAGCGGGATAGTCGCCGGCCTCACGGCCCAGGGCCTGACGGT
CGAGCATGTGGCCACCGCTTCGGCAGCGCGGGCCATGCTCGGCGTGGCCGATTTCGACGTGATGGTACTGGATCTTGGCC
TGCCGGATGAAGACGGTTTGAAGCTGCTCAAGCAGCAGCGCCAGCAGGGCCTGGAGATTCCGGTGCTGATCCTCACCGCC
CGCGACTCGGTGACCGATCGGGTCGATGGCTTGCAGGCCGGTGCCGACGATTACCTGCTCAAGCCGTTCGACCTGCGGGA
ACTGGCGGCGCGCCTGCACACCCTGTTGCGCCGGGTGGCGGGGCGCAGCGTCAACCTCATTGAACACGGACGCCTGACCT
ATGACCCGAGCACCCGGGAAACCCTGCTCGGTGGCCAACCGGTGGACCTCTCGCGGCGCGAGCAATCCCTGCTCCAGGCT
CTGCTGCACAACCGTGGCCGGGTGCTGTCCAGCGAGCAACTCAAGGACAGCGTCTACGGTTTCAACGATGAGCTGGAGAG
CAACGCGCTGAATGTGCACATCCACCACCTGCGGCGCAAACTCGGCAACGGCATCGTTGAAACCGTGCGCGGCCTCGGCT
ATCGCCTGGGCCCGGCCGACGGTGAGGAGAACCGCTAA

Protein sequence : 
MHVLVCEDDELIASGIVAGLTAQGLTVEHVATASAARAMLGVADFDVMVLDLGLPDEDGLKLLKQQRQQGLEIPVLILTA
RDSVTDRVDGLQAGADDYLLKPFDLRELAARLHTLLRRVAGRSVNLIEHGRLTYDPSTRETLLGGQPVDLSRREQSLLQA
LLHNRGRVLSSEQLKDSVYGFNDELESNALNVHIHHLRRKLGNGIVETVRGLGYRLGPADGEENR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 6e-50 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB3 YP_008001505.1 transcriptional regulatory protein QseB BAC0487 Protein 1e-34 44
qseB3 YP_008001505.1 transcriptional regulatory protein QseB NC_002516.2.879194.p Protein 4e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB3 YP_008001505.1 transcriptional regulatory protein QseB VFG1389 Protein 1e-24 44
qseB3 YP_008001505.1 transcriptional regulatory protein QseB VFG0473 Protein 1e-36 43
qseB3 YP_008001505.1 transcriptional regulatory protein QseB VFG1390 Protein 1e-26 41