Gene Information

Name : PFLCHA0_c40900 (PFLCHA0_c40900)
Accession : YP_008001358.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Virulence
Product : DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4589901 - 4590098 bp
Length : 198 bp
Strand : +
Note : -

DNA sequence :
ATGAACAACCAACTGCGCGAACTGCGCACCCGGCAAGGCTGGTCCCAGGCCGAACTGGCCACCCGCCTCGAGGTGTCACG
GCAGACGGTGAATGCCATCGAGACCGGGCGCTACGACCCCAGCCTGCCCCTGGCGTTCAAGATTGCCCGGGCCTTCCAGC
TGCCCATCGAAAGCATTTTCAGCCCCGACGAGGACTGA

Protein sequence :
MNNQLRELRTRQGWSQAELATRLEVSRQTVNAIETGRYDPSLPLAFKIARAFQLPIESIFSPDED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 7e-08 54
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 5e-08 54
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 2e-10 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PFLCHA0_c40900 YP_008001358.1 DNA-binding protein VFG2168 Protein 2e-08 54
PFLCHA0_c40900 YP_008001358.1 DNA-binding protein VFG2175 Protein 2e-08 54