Gene Information

Name : PFLCHA0_c40700 (PFLCHA0_c40700)
Accession : YP_008001338.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Unknown
Product : membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4572148 - 4573467 bp
Length : 1320 bp
Strand : -
Note : -

DNA sequence :
ATGATTAACGCAGTAATTGCCGCGGTTGGCGTAATGCTGGTGCTCAGCCTGTCCCGCGTGCATGTAGTGATCGCCCTGAT
CATTGGCGCCCTGGTGGGCGGCCTGGCCGGCGGCCTGGGCATCGAGGCCACGCTCAAGGCCTTCAATAGCGGCCTGGGGG
GCGGTGCCACCGTGGCCATGTCCTACGCCTTGCTCGGTGCTTTCGCCGTGGCGATTGCCAAATCCGGGCTGGCCCACGCG
TTGGCGGACAAGATCCTGCTGCTGGTGGACCGGCAGGACGCCAACGGCGGCGGCCAGGTCAAGTGGCTGCTGATCGGCCT
GCTGTGGGTGGTGGCGATTGCCTCGCAGAACATCCTGCCGATCCACATTGCCTTCATTCCGCTGCTGGTGCCGCCGCTGC
TGTATGTGCTGACCAAGCTGCAACTGGATCGCCGGCTGATCGCCTGTGTGATCACCTTCGGCCTGATCACCCCCTACATG
TTCCTGCCGGTGGGTTTCGGCAACATCTTCCTCAACGAAATCCTCCTGGCCAACGTGGCCCGCAGCGGCGTCGATATCAG
CCAGGTCAACGTCACCCACGCCATGGGCATTCCCGCCCTGGGCATGCTTTGCGGCTTGCTGCTGGCGTTCTTCAGCTACC
GCAAGAAGCGCGTCTATGACCTGGACCGCATCGAGAAGGTCGAGCAGGTGGCGGTGCAGTACAACCCGCGGACCCTGCTG
GTGGCCGCGGCGGCCATAGTCGCGGCGTTCGTGATCCAGCTGCTGCTGGACTCGATGATTATCGGTGCCTTGTGCGGTTT
TCTGATTTTCTCGGTGTCGGGCATCGTGCGCTGGCGCGAGACTGACGAGCTGTTCACCGAAGGCATGAAGATGATGGCCA
TGATCGGCTTCATCATGATCGCCGCCTCGGGGTTCGCCGAAGTGATGAAGGCCACCGGCGAGGTCAATTCCCTGGTCCAG
GCCTCGGCGGCCTGGATCGGCCACAGCAAGGGCGTGGGCGCCTTGCTGATGCTGCTGGTGGGCCTGCTGGTGACCATGGG
CATCGGCTCGTCGTTCTCCACGGTGCCGATCCTCGCGGCGATCTTCGTGCCTTTGTGTGTGCAACTGGGCTTCAGCCCGC
TGGCCATCGTCTGCATCGTCGGCACCGCCGGTGCCCTGGGCGATGCCGGTTCGCCGGCCTCGGACTCGACCCTGGGACCG
ACCTCGGGCCTGAATATCGACGGCCAGCACCACCACATCTGGGACACCGTGGTTCCGACCTTCCTGCACTACAACCTGCC
GCTGCTGGCCTTCGGCTGGGTGGCGGCCATGGCCCTCTGA

Protein sequence :
MINAVIAAVGVMLVLSLSRVHVVIALIIGALVGGLAGGLGIEATLKAFNSGLGGGATVAMSYALLGAFAVAIAKSGLAHA
LADKILLLVDRQDANGGGQVKWLLIGLLWVVAIASQNILPIHIAFIPLLVPPLLYVLTKLQLDRRLIACVITFGLITPYM
FLPVGFGNIFLNEILLANVARSGVDISQVNVTHAMGIPALGMLCGLLLAFFSYRKKRVYDLDRIEKVEQVAVQYNPRTLL
VAAAAIVAAFVIQLLLDSMIIGALCGFLIFSVSGIVRWRETDELFTEGMKMMAMIGFIMIAASGFAEVMKATGEVNSLVQ
ASAAWIGHSKGVGALLMLLVGLLVTMGIGSSFSTVPILAAIFVPLCVQLGFSPLAIVCIVGTAGALGDAGSPASDSTLGP
TSGLNIDGQHHHIWDTVVPTFLHYNLPLLAFGWVAAMAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01481 YP_003783881.1 hypothetical protein Not tested PiCp 5 Protein 2e-85 59
CpC231_1474 YP_005683838.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 2e-85 59
CpI19_1481 YP_005685924.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 2e-85 59
Cp1002_1472 YP_005681739.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 2e-85 59
BJAB07104_00352 YP_008207817.1 putative permease Not tested AbaR25 Protein 9e-76 52
BJAB0868_00356 YP_008211682.1 putative permease Not tested AbaR26 Protein 9e-76 52