Gene Information

Name : PFLCHA0_c37890 (PFLCHA0_c37890)
Accession : YP_008001059.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Unknown
Product : host specificity protein J
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4274510 - 4277599 bp
Length : 3090 bp
Strand : -
Note : -

DNA sequence :
ATGAACAACCAGATCATCACCGGCAGCAAAGGAGGCGAGTCGAAGCCGCGGCCGTCCGTTGAGGCCCCCGACAGCCTGCA
AAGTACCGCGTATGCGCGGATCCTTGACCTGGTGAGCGAAGGCGAGATCCAGGGCCTGGTCGCGGGCGAGCGCTCGGTCT
ACCTCGACGAGACGCCCCTGGCCAATGCCGACGGCACCCGTAATTTCAGCGGCGTCACCCTGGACGCCCGCACCGGCAGC
CAGGATCAGCTGCATATCCCGGGCTTTCCGGCGGTCGAAAGTGAAATTGCGGTAGGGGTTGAGCTGAAGTATGGCCAGCC
CTGGGTTCGCGCTGTGCAGAACCTGCAGCTGTCGGCCGTGCGCGTGCGTTTGTCTACCCCGCGCCTGGCCCAGACCAACA
CCAGCAACGGCGACACCAACGGCTACACCGTGCAGTACAAGATCGAGGTTTCCACCGACGGCGGGGCCTATGTCCAGGTG
CTCGCCTCGGCGTTCAGCGGCAAGACCTCGACCAAGTACGAGCGCTCCCACCGGGTGGACTTGCCGCCGGCGAGCAGCAA
CTGGCAGGTCCGAGTGACGCGCCTAACTCCGAACAGCACCAGCAGCGTGATCGCTGACACCACGAACATCGACGCCATCA
CCGAGATCATCGACGCCAAGCTGCGTTATCCAGGTTCCGCTGTCGTTGGCCTGCAATTCGATGCCTCCCAGTTCCAGTCG
ATCCCCACCAGGTCCTTCGACCTGCGCGGCCGGATCATTCGGGTGCCGAGCAACTACGACCCAGAAAGCCGGCTGTACTC
CGGCGTCTGGGATGGTTCGTTCAAGACGGCCTGGACCGACAACCCGGCCTGGATCTTCTACGACCTGCTGCTGCACTTCC
GCTATGGCCTGGGCCACCTGCTGAACGAAGGCCAGGTGGATCGGTGGGAGCTGTACCGCATCGGCCAGTACTGCGACCAG
TCGGTCCCGGACGGGAAGGGCGGCATGGAGCCGCGGTTTACCTGCAATCTGTTCCTGCAGACCAGGTCGAACGCTCTCGA
CGTGCTGCAAGACCTGGCCACCACCTTTCGCGGAATGGCCTATTGGGCCGCTGGCTCGGTGATGGCCATTGCCGATATCC
CGGAAGACCCGGTGTACACCTACTCGAATGCCAACGTGATCGACGGCAAGTTTGGCTATTTCGGCTCTGCGAAGAAGACC
CGCTACACCGTGGCTCTGGTGAGCTGGAACGATCCGGCCGACTTCTACCGGCAAAAGGTTGAGTATGTCGACGACCAGGC
CGGCATCACCCGCTACGGCATCCAGCAAACCGAGATCACCGCCACCGGCTGCACGTCCCAGGCTCAAGCTCAGCGCATCG
GCAAGTGGGCGCTGCTGACCAACCGCCTGGAAACCGAAAGCGTGGGGTTCTCCGTGGGCCTGGACGGCACCCTGGCGCGC
CCCGGGCAGATTATCCGCATCGCGGACAATGATCGGGCAGGGCGCCGGATTGGTGGGCGCCTGCGCTCTTCCACGCTCGA
TAGCCTGGTACTGGATGCCGACGTGAAGGCATACCCCGGCGACACCATCACAGTGATCATGCCCACGGGCACTGCTGTCT
CCCGCAAGATCAAATCGGTCGGGTATCCGCTGACCTGGGACCGCAAGGGGATCAAGTGGTCAAGCGGCCGCGTGACAATG
GATACCACCGGGTTTCCTGCTGAAGTCCAGCAGGTGGTGCTGGAGAAGAAGCTGGATGAATTGCCGCCCCAGCACTCGAT
GTGGGCCATAGACTCTCCAACCCTGGCCACGCAGCTGTTTCGCGTCATGTCCGTGGCTGAGGACTTTTCCGACTCCGAGA
TCAAGTTCACGATCAGCGCGGTACGCCACAACGCGAGCAAGTACGGCGCAATCGACAACGGCACGCGCATCGAGCGGCCG
CCGGTGACGGTGATCCCGCCGAGTGTCCAGAGGCCGCCGGCGAACGTAACGCTGAGCAATGACCACTTCGTCGACCAGGG
CAGCGCGGTCAGCGTCATGACCATCGAGTGGGAGAAGCCCGAGGCGGCGATTGCCTACGAGGTCTACTGGCGCAAGAACG
ACGGCGATTGGATCTTTGCTGGTCGCACGGGCACCACGTCCATCGATGTGAGCGGGATCTATGCGGGGCGGTATGTGGCC
AAGGTGCGGGCCATCAACTCGCTCGACATCGGGTCGGTGTTCGCGACCTCAGTCGAGACCGTGCTGAACGGCAAGACCAC
GCCGCCGCCGGTGCCGTCGTCCTTCACCGCCGAGTCGATCGTGTTCGGCATCAAGTTGGCCTGGGGCATTCCCTCGGGGC
TCAGTACCGCGGACGTGCAGCGCACCGAAATCTGGTACAGCCAGACCAACCAGGTGGCCACGGCGACCAAGTTCGGAGAC
TACGCCTATCCGCAGACAGACCTGACAATTATGGGCCTGGCTTCCGGGGTTCGGTTTTACTTCTGGGCGCGTCTGGTGGA
CCGCATCGGCAACGTAGGGGATTTCCGCGGGCCGGTCACCGGGCAGTCGTCCTCCGATGCCGGGCCGATCCTCGAGTACC
TGAACGACCAGATCACCGAGACGCAGTTGAGCCAGCACCTGCTCGAGAAGATTGACTCCGGCGGTGGCGCGTCGGTTGAG
ATCGAACAGGTCAAGACAGAGCTCGCTGCGATGTACTCGATCAAGACGCAGCTCACCGTGGACAATAAGCCCTATCTGGC
CGGCATCGGTGTCGGGGTGGAGAACAACGAAGGGATCATCACCAGCCAGGTGCTGATCGCCGCAAGCCGATTTGCAATTG
TCGACCCGAACGCTGCGGAGATCTATTACCCATTTGTTGTTCAAAACAATGCCGCCTATATCGACACTGCATTCATTCAA
GACGGCACTATCACAAACGCAAAAATAGGTGACTACATCGAGTCAGATGGCTATATCGAAGGGCAAAGGGGCTGGAAAAT
GAACAAAAACGGCACTCTTGATATCAACGGAAACGGAGTTGGCTACAGGCTCCAGATCATGGATCGGGGCGTCTATCTCA
CCGATACCGAGACCGGCGTCCAGGTCGTAGAACTGGGTCTTCTGTCGTGA

Protein sequence :
MNNQIITGSKGGESKPRPSVEAPDSLQSTAYARILDLVSEGEIQGLVAGERSVYLDETPLANADGTRNFSGVTLDARTGS
QDQLHIPGFPAVESEIAVGVELKYGQPWVRAVQNLQLSAVRVRLSTPRLAQTNTSNGDTNGYTVQYKIEVSTDGGAYVQV
LASAFSGKTSTKYERSHRVDLPPASSNWQVRVTRLTPNSTSSVIADTTNIDAITEIIDAKLRYPGSAVVGLQFDASQFQS
IPTRSFDLRGRIIRVPSNYDPESRLYSGVWDGSFKTAWTDNPAWIFYDLLLHFRYGLGHLLNEGQVDRWELYRIGQYCDQ
SVPDGKGGMEPRFTCNLFLQTRSNALDVLQDLATTFRGMAYWAAGSVMAIADIPEDPVYTYSNANVIDGKFGYFGSAKKT
RYTVALVSWNDPADFYRQKVEYVDDQAGITRYGIQQTEITATGCTSQAQAQRIGKWALLTNRLETESVGFSVGLDGTLAR
PGQIIRIADNDRAGRRIGGRLRSSTLDSLVLDADVKAYPGDTITVIMPTGTAVSRKIKSVGYPLTWDRKGIKWSSGRVTM
DTTGFPAEVQQVVLEKKLDELPPQHSMWAIDSPTLATQLFRVMSVAEDFSDSEIKFTISAVRHNASKYGAIDNGTRIERP
PVTVIPPSVQRPPANVTLSNDHFVDQGSAVSVMTIEWEKPEAAIAYEVYWRKNDGDWIFAGRTGTTSIDVSGIYAGRYVA
KVRAINSLDIGSVFATSVETVLNGKTTPPPVPSSFTAESIVFGIKLAWGIPSGLSTADVQRTEIWYSQTNQVATATKFGD
YAYPQTDLTIMGLASGVRFYFWARLVDRIGNVGDFRGPVTGQSSSDAGPILEYLNDQITETQLSQHLLEKIDSGGGASVE
IEQVKTELAAMYSIKTQLTVDNKPYLAGIGVGVENNEGIITSQVLIAASRFAIVDPNAAEIYYPFVVQNNAAYIDTAFIQ
DGTITNAKIGDYIESDGYIEGQRGWKMNKNGTLDINGNGVGYRLQIMDRGVYLTDTETGVQVVELGLLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_01044 YP_001437149.1 hypothetical protein Not tested Not named Protein 0.0 47