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Name : cph23 (PFLCHA0_c36770) Accession : YP_008000948.1 Strain : Pseudomonas fluorescens CHA0 Genome accession: NC_021237 Putative virulence/resistance : Unknown Product : phytochrome-like protein Cph2 Function : - COG functional category : - COG ID : - EC number : - Position : 4128560 - 4129834 bp Length : 1275 bp Strand : + Note : - DNA sequence : ATGCTCAAGCCCCTGCGAGTCCTGGTGCTGGACGACCATCCGATCCACTGCCTGCAGGCCCGGCACCTGTTGCAGGCGGC CGGGTTCGGCCGGGTGGACAGCGCCCTCGATGCGCGCCAGGCCCTGGCCATGCTGCACCGGCAGGTCTACGACCTGGTGC TGGTGGACCTGCACATGCCGGAAATGGATGGGGTGCAGTTCATCCATGCCCTGACCGGTGTCGACCAGGTGCCGATCCTG GCCATCGTCTCGTCCTGCTCGCGGCGGTTGATGAACAGCGTCAGCCTGATGGCCAAGGAGAAGGGCCTGGCGGTACTCGG CACCTTCCCCAAGCCCCTGGAAGCGATCCACGTCGAGCAGATCAGCGCCATCATCGGCAACAGCCAGGACCCGGTGCTGG CAGCCCGGCCCGAGCACGAGGCGGTGTTCGACCGCCAGGTCCTGGAGCGGGCCATCGAACGCCGCGAGCTCAAGGCCCGG TTCCAGCCCCGGCGCTCGCTGAGCACTGGCCGGATCGTCGGCGCGGAGGCCCTGGTGCGCTGGAACAGTCCGTCCTTCGG GCTGCTGATGCCGGACTCGTTCCTTGCCTCCATCAGCCGCTGCCAGCTGGACCATGCGCTGTTGCTGCTGATGCTCGACG ACGCCCTCCAGGCGCAGCAGCACTGGCAACGCCTGGGCCACCGCCTCAGCGTATCGGTGAACCTGCCCACCGGACTGCTG GACGACCCCGGCCTGCCCGACCAGTTGCAGCAGATCACCCTCGCCTCGGGGCTGGCCACCAGCGATATCTGCTTCGAGCT GCTGGAAACCGAGCGGCCACTGTCCCCCGGGCAGTATCATATGGGCGCCAGCCGCCTGCGCCTCAAAGGCTTCGGCCTGG CACAGGACGACTTCGGCATGGGCTACAGTTCCATGTACAGCCTGATCTCCACGCCCTTTACCGAGATGAAGATCGACCGC CACTTCGTGCATGGCGCCGCAGCCGACGATGCCCGCGCCGCAGCCCTGGTGGCGGCGGTGCAACTGGGCCGGCAACTGGG CCTGGAAGTGGTGGCCGAGGGCGTGGAATCGGCCCGTGACCTGGAATTTCTGCGCCAGATTGGCTGCGACAGTGCCCAGG GGTATCTTATTTCCGCCGCATTGGAGCTGGACGCCTTCACACAACTGCTGGGATGCACTGTTACTCCACCCTTTTCGTCA CCTACCCGGCCCGCCTCCTCTCTCCCATGCCAGACATCCCGCTACGCCGCATCGCGAAAAACTTCCGACGATTGA Protein sequence : MLKPLRVLVLDDHPIHCLQARHLLQAAGFGRVDSALDARQALAMLHRQVYDLVLVDLHMPEMDGVQFIHALTGVDQVPIL AIVSSCSRRLMNSVSLMAKEKGLAVLGTFPKPLEAIHVEQISAIIGNSQDPVLAARPEHEAVFDRQVLERAIERRELKAR FQPRRSLSTGRIVGAEALVRWNSPSFGLLMPDSFLASISRCQLDHALLLLMLDDALQAQQHWQRLGHRLSVSVNLPTGLL DDPGLPDQLQQITLASGLATSDICFELLETERPLSPGQYHMGASRLRLKGFGLAQDDFGMGYSSMYSLISTPFTEMKIDR HFVHGAAADDARAAALVAAVQLGRQLGLEVVAEGVESARDLEFLRQIGCDSAQGYLISAALELDAFTQLLGCTVTPPFSS PTRPASSLPCQTSRYAASRKTSDD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pvrR | AAP84164.1 | PvrR | Not tested | PAPI-1 | Protein | 4e-52 | 44 |
