Gene Information

Name : mdeA2 (PFLCHA0_c35550)
Accession : YP_008000827.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Resistance
Product : methionine gamma-lyase MdeA
Function : -
COG functional category : -
COG ID : -
EC number : 4.4.1.11
Position : 3977088 - 3978341 bp
Length : 1254 bp
Strand : +
Note : -

DNA sequence :
ATGAACAATAAAAACAGTGACCTTGGTTTTTCCACCCGTGCCATCCATCACGGCTACAACCCCCAGGAGCATCAGGGCGC
GCTGATCCCGCCGATCTACCTGACCTCCACCTTCACCTTCGCCACCGCCGAATATGGCGCCGGCTGTTTTGCCGGTGAAG
AACCCGGCTACTTCTATACCCGCATCGGCAACCCGACCCTGGCGTTGCTGGAAGCGCGCATGGCCGCCCTGGAAAACGGC
GAAGCGGCCGTGGCGTTCGGCTCCGGCATGGGGGCGATTGCCGCGACCTTGTGGACCCTGCTGCGCCCGGGCGACGAGGT
CATCGTCGGCCAGACTTTGTACGGTTGCACCTTTGCCCTGCTACACCACGGCCTTGGCGAATTCGGCGTCAAGGTACGCC
ATGTCGACCTGACCGACCTGGGCGAGCTACGGGCGGCCATCGGCCCGGCCACGCGGATGATCTATTTCGAAACCCCGGCC
AACCCCAACATGCAACTGGTGGACATCGCCGCCGTGGCCCAGGTGGCCCGCCAGCATCCCGGCCTGCTCGTGGCGGTGGA
CAACACCTACTGCACACCTTACCTGCAGCGCCCGCTGGAACTGGGCGCCGACCTGGTGCTGCACTCGGCCACCAAGTACC
TCAGCGGCCATGGCGACATCACCGCCGGCATCGTGGTCACCGGCCAGGCCCTGGCCGAACGCATCCGCCTGCAGGGCCTG
AAGGACCTGACCGGCGCGGTGCTCTCGCCCCAGGACGCTTTTCTCCTGATGCGCGGCCTCAAGACCCTGGCCCTGCGCAT
GGATCGCCATTGCGCCAACGCCCAGGCCGTCGCCCAGTTCCTCCAGGACCACCCCGCCGTGGCCTGGGTCGCCTACCCGG
GGCTGGCATCCTTTGCCCAACACGCCCTGGCCGCAAGACAGATGAAGCTGCCCGGCGGCATGATCGCCTTCGAACTCAAG
GGCGGGCTGGCCAGCGGGCGACGCTTCATGAACGCCCTGGGGCTGTTCAGCCGCGCGGTCAGCCTGGGGGATGCCGAATC
CCTGGCCCAGCACCCGGCGAGCATGACCCATTCCACCTACACCCAGGAGGAACGGGCCGAACACGGCATCGCCGAGGGCC
TGGTACGGCTGTCGGTGGGGCTGGAAGACATCGCCGACCTGCTGGCCGACATCGCCCAGGCCCTGGACGCCAGCGCCGAA
CCCGCGCGCCCCACCCTGGAGGCCGTGGGCCGGATCGGCAAGGCCCTGCCTTGA

Protein sequence :
MNNKNSDLGFSTRAIHHGYNPQEHQGALIPPIYLTSTFTFATAEYGAGCFAGEEPGYFYTRIGNPTLALLEARMAALENG
EAAVAFGSGMGAIAATLWTLLRPGDEVIVGQTLYGCTFALLHHGLGEFGVKVRHVDLTDLGELRAAIGPATRMIYFETPA
NPNMQLVDIAAVAQVARQHPGLLVAVDNTYCTPYLQRPLELGADLVLHSATKYLSGHGDITAGIVVTGQALAERIRLQGL
KDLTGAVLSPQDAFLLMRGLKTLALRMDRHCANAQAVAQFLQDHPAVAWVAYPGLASFAQHALAARQMKLPGGMIAFELK
GGLASGRRFMNALGLFSRAVSLGDAESLAQHPASMTHSTYTQEERAEHGIAEGLVRLSVGLEDIADLLADIAQALDASAE
PARPTLEAVGRIGKALP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-57 43
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-58 43
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 2e-48 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mdeA2 YP_008000827.1 methionine gamma-lyase MdeA BAC0207 Protein 5e-137 76