Gene Information

Name : dhbE (PFLCHA0_c35370)
Accession : YP_008000809.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Virulence
Product : 2,3-dihydroxybenzoate-AMP ligase DhbE
Function : -
COG functional category : -
COG ID : -
EC number : 6.3.2.-
Position : 3955748 - 3957415 bp
Length : 1668 bp
Strand : -
Note : -

DNA sequence : 
ATGTCCACTTTCGATGACCTCAAGGATTGCCCCTCTTGGCCCGAAGACTTCGCCCAGCGCTACCGCCAGGCCGGCTACTG
GCGCGACGAAACCTTTGGCGACCTGCTGCGCAGCGCCGCCCAGGCCTTTGCCGAGCGTGAAGCACTGACCGAGGGCGAGC
AGCACCTGAGCTACCGGCAACTGGACCTGCGGGTCGACCAACTGGCCGCCGGCCTGTACCGGCTGGGGCTGCGGGCCGGC
GACAACGTGGTGCTGCAACTGCCCAACAGTGCGGCCTTCGTCGAAGTCTGCTTTGCCCTTTACCGCCTCGGGGTGCGGCC
GATCTTCGCGCTGCCGGCCCACCGGCACCTGGAAATCGGCCGCTTCTGCGAGTTCGCCCAGGCCCGGGCCTACTTCTGCG
CCGACCGGGACGCCAGCTTCGACTATCGGGCCATGGCCCGCGACCTCAAGGACCGCAACCCGCAGCTGGAGTGGGTGGTA
GTCGCCGGCGAGGCCGAGGAATTCACGGCCTTGCACAGCCTGTATGAGCCGGCGCCTGCGCGCACCTTCCTGCCCCCCAG
CGCCGACGCGGTGGCCTGTTTCCAGCTCTCCGGCGGCTCCACCGGGGTGCCCAAGCTGATCCCGCGCCGGCACCACGAAT
ACCTCTACAACCTGCGGGCCAGTGCCGAGCGCTGTGGCCTGTCCGAGGCCAGCGTGTACCTGGTGGCGCTGCCCATGGCG
CACAACTTTCCCATGTGCTGCCCAGGGTTCATCGGCACCTTTTCGGTGGGCGGGCGGGTGGTGCTGAGCCCCTCGCCGAG
CCCGGAAGTCTGCTTCGAACTGATCGAGCGCCAGGGGGTGACCCACACCGCGCTGGTGCCGCCCCTGGCCCTGGTCTGGC
TGGAAGCGGCCCAGGCCCGTGGGCGTGGCCTGGCGCCGTTGCAACTGCTGCAAGTGGGCGGCGCCAAACTCAGCTACGAG
GCCGCAAGGCGCATCGAACCGGTGCTCGGCTGCCGCCTGCAGCAGGTGTTCGGCATGGCCGAGGGGCTGATCTGCTACAC
CGACCCCGAGGACCCGCCACAGCGGGTGCTGCACACCCAGGGCCGGCCGCTGTCGCCGGCGGACGAAATTCGTGTGGTGG
ACGAGCATGAGCAACCGGTGCCGGTGGGGCAGGTGGGGCAGTTGCTGACCCGCGGCCCCTACACCATCCGCGGTTACTAC
CGTTACCCCGAGCACAACGCCCAGGCCTTCACGGCCGATGGTTTCTACCGCACCGGCGACCGGGTCATGCTCACCGCCGA
CGGCTACCTGATGGTGGAAGGGCGCGACAAGGACCTGATCAACCGCGGGGGCGAAAAGATCGCTGCCGAAGAAGTGGAAA
ACCTGCTGCTCAGCCACCCGGCGGTGGCCGACATCGCCCTGGTGGCGATGCCTGATGCCTTCCTGGGCGAACGCACCTGC
GCCTTCGTCATCCCCCGCGGCACCGCGCCCCGGGCCCCGGAACTGCTGCGTCACCTAAGGGCCCAGGGCCTGGCGGCGTT
CAAGCTGCCGGACCGCTTCGAGTTCATCCCGGCCTTCCCCCAGACCGGGGTCGGCAAGGTCAGCCGCAAGCACCTGCGCG
AGGCGATCCAGGCCCTGTACTTCGGCGCCCAGGCCGAACCCCTGGAGGGAAGTGGCGCCCGTGGCTGA

Protein sequence : 
MSTFDDLKDCPSWPEDFAQRYRQAGYWRDETFGDLLRSAAQAFAEREALTEGEQHLSYRQLDLRVDQLAAGLYRLGLRAG
DNVVLQLPNSAAFVEVCFALYRLGVRPIFALPAHRHLEIGRFCEFAQARAYFCADRDASFDYRAMARDLKDRNPQLEWVV
VAGEAEEFTALHSLYEPAPARTFLPPSADAVACFQLSGGSTGVPKLIPRRHHEYLYNLRASAERCGLSEASVYLVALPMA
HNFPMCCPGFIGTFSVGGRVVLSPSPSPEVCFELIERQGVTHTALVPPLALVWLEAAQARGRGLAPLQLLQVGGAKLSYE
AARRIEPVLGCRLQQVFGMAEGLICYTDPEDPPQRVLHTQGRPLSPADEIRVVDEHEQPVPVGQVGQLLTRGPYTIRGYY
RYPEHNAQAFTADGFYRTGDRVMLTADGYLMVEGRDKDLINRGGEKIAAEEVENLLLSHPAVADIALVAMPDAFLGERTC
AFVIPRGTAPRAPELLRHLRAQGLAAFKLPDRFEFIPAFPQTGVGKVSRKHLREAIQALYFGAQAEPLEGSGARG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
irp5 CAA73130.1 Irp5 protein Virulence HPI Protein 1e-109 51
irp5 YP_001006819.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 2e-109 51
irp5 YP_002346898.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 5e-108 51
ybtE NP_669710.1 salicyl-AMP ligase Virulence HPI Protein 5e-108 51
ybtE NP_993003.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 5e-108 51
ybtE YP_070120.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 5e-108 51
ybtE CAA21394.1 - Virulence HPI Protein 5e-108 51
ybtE YP_853079.1 yersiniabactin siderophore biosynthetic protein Virulence PAI IV APEC-O1 Protein 4e-108 51
ybtE AAA93464.1 yersiniabactin 2,3-dihydoxybenzoate-AMP ligase Virulence HPI Protein 3e-108 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
dhbE YP_008000809.1 2,3-dihydroxybenzoate-AMP ligase DhbE VFG0168 Protein 5e-154 61
dhbE YP_008000809.1 2,3-dihydroxybenzoate-AMP ligase DhbE VFG0932 Protein 1e-108 47
dhbE YP_008000809.1 2,3-dihydroxybenzoate-AMP ligase DhbE VFG1817 Protein 9e-99 46