Gene Information

Name : hpcR (PFLCHA0_c34160)
Accession : YP_008000690.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Resistance
Product : homoprotocatechuate degradative operon repressor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3829190 - 3829612 bp
Length : 423 bp
Strand : -
Note : -

DNA sequence :

ATGAACACACCCAGACCTTCCCTGACCTTGACCCTGCTGCAGGCCCGTGAGGCCGCCATGGCGTTTTTCCGTCCCTCGCT
GAACCAGCACGACCTGACCGAACAGCAATGGCGGGTGATCCGCATCCTGCGCCAGAACGGCGAGCTGGAGAGCCATCAGC
TGGCGAAGATGGCCTGCATCCTGCCGCCGAGCATGACCGGCGTGCTGACCCGCCTGGAGCGCGACCAGTACGTCAGCCGG
CGCAAGTCTCCGGAAGACCAGCGCCGCCTGTTCATCACCCTGACCGACAAGGGCCAGGCCTGTTTCGAATCCATGAGCGG
CGACATGGAAATCAACTACCAGAAGATCCAGCAGCAGTTCGGCGAAGACAAGATGCAAGCCTTGCTGGCCCTGCTCAACG
AACTGAAGCAGATCAAGCCCTGA

Protein sequence :

MNTPRPSLTLTLLQAREAAMAFFRPSLNQHDLTEQQWRVIRILRQNGELESHQLAKMACILPPSMTGVLTRLERDQYVSR
RKSPEDQRRLFITLTDKGQACFESMSGDMEINYQKIQQQFGEDKMQALLALLNELKQIKP

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
hpcR	AAO17176.1	HpcR	Not tested	tcd island	Protein	1e-29	49

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
hpcR	YP_008000690.1	homoprotocatechuate degradative operon repressor	BAC0505	Protein	1e-27	46