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Name : rcsC2 (PFLCHA0_c32230) Accession : YP_008000497.1 Strain : Pseudomonas fluorescens CHA0 Genome accession: NC_021237 Putative virulence/resistance : Unknown Product : sensor kinase protein RcsC Function : - COG functional category : - COG ID : - EC number : 2.7.13.3 Position : 3591584 - 3594421 bp Length : 2838 bp Strand : + Note : - DNA sequence : ATGAGATTAAAAAGCTACCTGCATCAGATCAATCCCCTATTTTCCAGTCCTGAAGCAGCCCGCCGGCTGCTTCGTGTCGT GGCGCTGATTTTTCTGGTCGGCCTGTTCGGCGCGGTCTACAACTTTCTTCGCTCCAGCCTGCACAACGAACTCTCACAAC GGCAAAGCTACATGAGCAGCGCCATTGCCGAGGCCCAGGCATTCTTCACCAGCCGCTCGGCCCTGTTGGAAAGCCTGAGC CTGGCGGCGGTCTACGACCCTGGGGAACATATCAGCCCCCCAGGCGCCAGCGGTGCCTCCCAAGAAGAGACGTACCTGCA ACTGGGTGGACCGCAGGGCAACCAGTGGGGGATCTGGCTGACCCTGCGCATGCGCAACTACCTGCAAAACAAGCAACTGA ACCTGCTCTACATTCCCGGCACCCGCGATCTGCAGGTGCAACGCCTGTTCAGCACCCGGCCACAGACCAGCGATCTGCCC GGCGGGTTGCTGGACAAGCTGATCGCTCTGCAGCCCGAGCAGATCCCTGTCGGCGAAGAACTTTGGCTGATGGACAACTC CGCGGCGGGCGCCCATCTATACATCTTCACTCGCCTTGACGAACGCTTCGCTCACTCAGGCTGGCTTGGACTGGAGATGG ACGGCAAGAGCGTCTCCGCCGCCCTCAGCGACCAGAGCGCCGGGGATTTCATGATGTTCAATTCCCAGGGCGGGCTGATT TTCAGCAGTGCGCCCAGTGCCCGACTGAGCGCCGACGTACGCCACGTCCAGGGCGGCAGTTTCTTCGGCTTTCTCGGCGG CCGCTGGTGGCCCGACCATCTGGTGATCCGCAAGCAGCTGGGGGCTACCGACTGGCAGCTGGTGTACTCCTTCGACCTGC AGAACCTGCTCAAGAGCCTCTGGCCGCAGTTGCTGGCGGCGCTGCTCATCAGCCTGACCGGCATGGCTCTGATCGGCCTG CTGACCCACTGGGTCGAAGTGCGCCTGATCGCCCCCGCCCTGCACCGGATCCAGGCCCTGGTCGAAAGCGAGGCCTTCAG CCGCGACGTGATCCAGATCGCCCCGGTGGCACTCTGTGTATTGCGCCGCAGCGATGGCCGGGTGGTGCTGGAAAACACCC TGTCCCAGCAATGGCTGGGCAACGGCAGCGAACGCGACCAGCTGTGTTCCGGGTGGATCGAGCAGGCCTTCGACCCGGCC CGCCCCAACAGCTCGGACTACTTTGAAACCGCCGACGGGCGCCATCTATACCTCAGCTCCGCCCCCACTCGCTACAACGG TGAGGACGTGCTGTTCTGCGCCTTCAGCGATATCAGCGCTCGCAAGCAGATCGAGGCGGCGCTGGAAGAAGCCAAGCGCC TGGCCGATACCGCCAATGAAGCCAAGACCCTGTTCCTGGCCACCATGAGCCACGAGATCCGCACGCCACTGTATGGCGTG CTCGGCACCCTGGAGCTGCTGTCGCGGACCCAGCTGGACAACCAGCAGAAGGATTACCTGCAAGCCATAGAAGGCTCTTC CGGTACGCTGCTGCAGTTAATCTGCGACGTGCTCGACGTGTCCAAGATCGAAGCCGGGCAACTGGCCCTGGAGCTCAGCG AATTCTCCTCCCTGGATCTGGTGCACGAGATCATCCAGGGCTACGCGGCGGCCGCCCAGGCCAAGGGCCTGCAGTTCTAT GCCTGTGTCGACCCGCAGTTGCCGGAGATCCTGCTCGGCGATGTCACCCGGATCCGCCAGATCCTCAGCAACCTGCTGAA CAACGCGGTCAAGTTCACCGATACCGGGCGCATTGTCCTGCGGGTCCGCACCGAAAGCCGCGATGGCGAGCGCAGCAACA TCCTCTGGCAGGTTTCCGACACCGGCCGGGGCATTGCCCAGGACGACCAGACACTGATCTTCGAGCCCTTCTACCAGACC GAAGGCAACACCAACGTGATCGCCGGCACCGGCCTGGGCTTGCCGATCTGCCAGCGCCTGACCCAATTGATGAACGGCAA TATCCGCATGGTCAGCGAGCTCGGCCTGGGCAGCAGCTTCACCCTGACTCTGCCGCTGGAGGCCTCGGCCGTGCAGGGCG ACACCCCGCTGATCAGCCCATTGCTGCCGGAGATGGTCTATGTGGTGTCCCCGGTGCGTGAACTGGCCGAATCGGTGGCG GGCTGGCTGCGCCGCTGGGGTGCCCGGGCCCAGTTCAGCCTGCCGAGCCCATCCGACCGGGCCCGGGGCAACGTACTGAT CGAACTACACCCCGGCAGCGTGGAGCAGCGCCTGGAACCCGACTGGCAGGGCCCCCTGGTGCTCGCCAGCGGCGATGGCC ATAACGAACCGCGGATCGACGGCGGCAGTTGGCAGATCAACACCAACAACCTGCGGGCGATCCATCAGGCCGTCAGCCAG GCCCAGGGGGTCTGGGTGGCCCAGAGCGAGGATCACTCCGATCACCGCGAGCTGAAAAAGCTCAGCCTGCATGTCCTGGT GGCCGAAGACAACGTGATCAACCAGTTGATCCTCAAGGACCAACTGGAAGAACTGGGGTGCAGCGTGGAGCTGGCCTCGA ACGGTGAAGAGGCCCTCTGCATCTGGAAGGCCGGTCGTTTCAACGTTGTGCTGACCGATGTGAACATGCCGAAACTCAAC GGTTATGAACTGGCCCAGGAGCTTCGGCGTCAAGGCTGTTCGATCCCCATCATCGGGGCAACGGCCAATGCAATGCGCGG AGAAGAAGAGCTCTGTCTTGCAGCCGGGATGAACCACTGCCTGGTGAAGCCCTTTGCATTAAGAGCGTTGTTCAACTATC TGGCGCCCTATGAAAGAGCCCCCCATGAAGTCCTGTAG Protein sequence : MRLKSYLHQINPLFSSPEAARRLLRVVALIFLVGLFGAVYNFLRSSLHNELSQRQSYMSSAIAEAQAFFTSRSALLESLS LAAVYDPGEHISPPGASGASQEETYLQLGGPQGNQWGIWLTLRMRNYLQNKQLNLLYIPGTRDLQVQRLFSTRPQTSDLP GGLLDKLIALQPEQIPVGEELWLMDNSAAGAHLYIFTRLDERFAHSGWLGLEMDGKSVSAALSDQSAGDFMMFNSQGGLI FSSAPSARLSADVRHVQGGSFFGFLGGRWWPDHLVIRKQLGATDWQLVYSFDLQNLLKSLWPQLLAALLISLTGMALIGL LTHWVEVRLIAPALHRIQALVESEAFSRDVIQIAPVALCVLRRSDGRVVLENTLSQQWLGNGSERDQLCSGWIEQAFDPA RPNSSDYFETADGRHLYLSSAPTRYNGEDVLFCAFSDISARKQIEAALEEAKRLADTANEAKTLFLATMSHEIRTPLYGV LGTLELLSRTQLDNQQKDYLQAIEGSSGTLLQLICDVLDVSKIEAGQLALELSEFSSLDLVHEIIQGYAAAAQAKGLQFY ACVDPQLPEILLGDVTRIRQILSNLLNNAVKFTDTGRIVLRVRTESRDGERSNILWQVSDTGRGIAQDDQTLIFEPFYQT EGNTNVIAGTGLGLPICQRLTQLMNGNIRMVSELGLGSSFTLTLPLEASAVQGDTPLISPLLPEMVYVVSPVRELAESVA GWLRRWGARAQFSLPSPSDRARGNVLIELHPGSVEQRLEPDWQGPLVLASGDGHNEPRIDGGSWQINTNNLRAIHQAVSQ AQGVWVAQSEDHSDHRELKKLSLHVLVAEDNVINQLILKDQLEELGCSVELASNGEEALCIWKAGRFNVVLTDVNMPKLN GYELAQELRRQGCSIPIIGATANAMRGEEELCLAAGMNHCLVKPFALRALFNYLAPYERAPHEVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| RL036 | AAP84163.1 | kinase sensor protein of two component regulatory system | Not tested | PAPI-1 | Protein | 1e-166 | 45 |
