Gene Information

Name : tpx (PFLCHA0_c29010)
Accession : YP_008000175.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Virulence
Product : putative thiol peroxidase Tpx
Function : -
COG functional category : -
COG ID : -
EC number : 1.11.1.-
Position : 3206233 - 3206733 bp
Length : 501 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTCAAGTCACTCTCAAAGGCAACCCGGTGCAGGTTAACGGCCAACTGCCGCAAGTCGGTTCCAAAGCCCCAGCGTT
CACCCTGGTGGGCGCAGGCCTGGCCGATGTTTCCCTGAGCAGCCTCGCCGGCAAGCGCAAGGTGCTGAACATCTTCCCAA
GCGTCGACACCCCGACCTGCGCCACCTCGGTGCGCAAGTTCAACGCCCAGGCCAACGAGCTGGCCAACACCGTGGTGCTG
TGCATCTCTGCCGACCTGCCATTCGCCCAGGCACGCTTCTGCGGCGCAGAAGGCCTGGAAAACGTGCAGAACCTGTCGAC
CCTGCGTGGCCGCGAGTTCATCGAGAACTACGGCGTGGCCATCGCCGACGGCCCGCTGGCCGGCCTGACTGCCCGCGCCG
TGGTGGTGCTGGACGAAAACGACAAGGTGCTGCACAGCGAGCTGGTCAAGGAAATCGCCGAAGAGCCGAACTACGATGCG
GCCCTGGCCGTGCTCAAGTAA

Protein sequence : 
MAQVTLKGNPVQVNGQLPQVGSKAPAFTLVGAGLADVSLSSLAGKRKVLNIFPSVDTPTCATSVRKFNAQANELANTVVL
CISADLPFAQARFCGAEGLENVQNLSTLRGREFIENYGVAIADGPLAGLTARAVVVLDENDKVLHSELVKEIAEEPNYDA
ALAVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 1e-35 49
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 8e-36 49
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 1e-35 48
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 8e-36 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_008000175.1 putative thiol peroxidase Tpx VFG0087 Protein 3e-36 49