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Name : pulE1 (PFLCHA0_c28150) Accession : YP_008000090.1 Strain : Pseudomonas fluorescens CHA0 Genome accession: NC_021237 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 3088682 - 3090103 bp Length : 1422 bp Strand : + Note : - DNA sequence : ATGACCACCCAGTTGCCCTACGCCTGGGCCAAGTCCCAGCGCATCCTCCTGCGCCACACCGAGCAGGGCGCGGTGCTGCT GGTGTGCCCCTCGACGCCTGGCTGGTCCATCAGCGAAGCCCGCCGCCAGTTCGGCCCGGCGCGCCTGGAGCGGATTCGCG ACGAGGAACTCGACGGCCTGCTGGCCACCGCCTACGCCGACACCGGCAGCGCAGCAGCGGTGGTCGGGGCGGCGGAGAAC GAGGTGGACCTGGACCGCCTGATGCAGGACATGCCGGAAATCACCGACCTGCTGGACACCCAGGACGGCGCCCCGGTGAT CCGCATGATCAACGCCTTGCTCACCCAGGCCGCGCGGGACGAGGCCAGCGATATCCATATCGAACCCTTCGAGACCCATT CGGTGGTGCGCTACCGGGTCGACGGCACCCTGCGCGACGTGGTGTCGCCACGCAAGGCGCTGCACGGCGCGCTGGTGTCG CGGATCAAGATCATGGCCCAGCTGGACATCGCCGAAAAACGCCTGCCCCAGGACGGGCGCATCGCCCTGCGGGTGGCCGG GCGGCCCATCGATATCCGTGTGTCCACGGTGCCCACCGGGCATGGCGAGCGGGTGGTGATGCGCCTGCTGGACAAGCAGG CCGGGCGCCTGCAACTGGAGACCCTGGGCATGGACCCGGACCTCCTGGCGCGCCTGGATACCCTGATCCGCCAGCCCCAC GGCATCGTCCTGGTCACCGGGCCCACCGGCAGCGGCAAGACCACCAGCCTCTACGCGGCCCTGGCCCGGCTGGATGCCAG CACCAGCAATATCCTCACCGTCGAGGACCCGGTGGAATACGACCTGCCGGGCATCAGCCAGATCCAGGTCAACGCCAAGA TCGACATGACCTTCGCCCTGGCCCTGCGGGCGATCCTGCGCCAGGACCCGGACATCATCATGATCGGCGAGATCCGCGAC CTGGAGACCGCGCAGATCGCGGTCCAGGCCTCGCTCACCGGGCACCTGGTGCTGGCGACCCTGCACACCAACGACGCGGT ATCGGCGGTCAACCGCCTGATCGACATGGGGGTGGAGCCGTTTCTCCTGGCCTCGTCGATGCTCGGGGTGCTGGCCCAGC GCCTGGTGCGGCGCCTGTGCAGCCAGTGCAAGGAGCAGGACCCGGCCAACCCCGGCACCTGGCGCCCGGTGGGCTGCCCG GCCTGCAACCACATCGGCTACAGCGGGCGAACCGGGATCCATGAGCTGTTCTGCATCGATGACGATGTGCGCAGCCTGAT CCACCAGGGCGCCGAGGAGCAGGCCCTGCGTGCCGCCGCGCGCCGGGCCGGGATGTTCAGCATGCGCGAAGACGGCGAAC GCTGGGTGCGCAGCGGCGCCACCGCGCCGGAAGAAATCCTGCGTGTGACACGGGACGCCTGA Protein sequence : MTTQLPYAWAKSQRILLRHTEQGAVLLVCPSTPGWSISEARRQFGPARLERIRDEELDGLLATAYADTGSAAAVVGAAEN EVDLDRLMQDMPEITDLLDTQDGAPVIRMINALLTQAARDEASDIHIEPFETHSVVRYRVDGTLRDVVSPRKALHGALVS RIKIMAQLDIAEKRLPQDGRIALRVAGRPIDIRVSTVPTGHGERVVMRLLDKQAGRLQLETLGMDPDLLARLDTLIRQPH GIVLVTGPTGSGKTTSLYAALARLDASTSNILTVEDPVEYDLPGISQIQVNAKIDMTFALALRAILRQDPDIIMIGEIRD LETAQIAVQASLTGHLVLATLHTNDAVSAVNRLIDMGVEPFLLASSMLGVLAQRLVRRLCSQCKEQDPANPGTWRPVGCP ACNHIGYSGRTGIHELFCIDDDVRSLIHQGAEEQALRAAARRAGMFSMREDGERWVRSGATAPEEILRVTRDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-105 | 58 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 8e-106 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pulE1 | YP_008000090.1 | general secretion pathway protein E | VFG0182 | Protein | 3e-114 | 62 |
| pulE1 | YP_008000090.1 | general secretion pathway protein E | VFG2048 | Protein | 1e-104 | 57 |
| pulE1 | YP_008000090.1 | general secretion pathway protein E | VFG1876 | Protein | 9e-111 | 51 |
| pulE1 | YP_008000090.1 | general secretion pathway protein E | VFG2426 | Protein | 2e-74 | 48 |
