Gene Information

Name : xcpT (PFLCHA0_c28100)
Accession : YP_008000085.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3082872 - 3083321 bp
Length : 450 bp
Strand : +
Note : -

DNA sequence : 
ATGGATATCGCGCCTGTAACATCCCCGCCCCGAGGCCTGCGCGGCCAGCGTGGCTTCACCCTGATCGAGATCATGGTCGT
GGTGGTGATCCTCGGGATCCTGGCAGCCATGGTGGTGCCCAAGGTCCTGGATCGCCCGGACCAGGCACGGGCCACGGCGG
CCAGGCAGGACATCGCCGGGCTCATGCAGGCCCTCAAGCTCTATCGCCTGGACCACGGCAGCTACCCGAACATGAACCAG
GGCCTGAAGGTGCTGGTGGAGCGCCCGGCCAATGCCAAGGACAGCAACTGGCGCTCCTACCTGGAACGTCTGCCCAATGA
CCCCTGGGGCCGCCCGTATCACTACCTCAACCCCGGTGCCAACGGCGAAGTGGATGTGTTTTCCCTCGGCGCCGATGGCC
AGCCCGACGGCGACGGCGTGAATGCCGATATCGGCTCCTGGCAACTATAG

Protein sequence : 
MDIAPVTSPPRGLRGQRGFTLIEIMVVVVILGILAAMVVPKVLDRPDQARATAARQDIAGLMQALKLYRLDHGSYPNMNQ
GLKVLVERPANAKDSNWRSYLERLPNDPWGRPYHYLNPGANGEVDVFSLGADGQPDGDGVNADIGSWQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-34 52
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 7e-34 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
xcpT YP_008000085.1 general secretion pathway protein G VFG1871 Protein 6e-41 61
xcpT YP_008000085.1 general secretion pathway protein G VFG0180 Protein 2e-36 57
xcpT YP_008000085.1 general secretion pathway protein G VFG2050 Protein 1e-34 52