Gene Information

Name : aldA1 (PFLCHA0_c22830)
Accession : YP_007999558.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase AldA
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.3
Position : 2528675 - 2530195 bp
Length : 1521 bp
Strand : +
Note : -

DNA sequence : 
ATGATCTACGCACAACCCGGAACCCCAGGCGCCGTCGTGTCCTTCAAGCCACGCTACGGCAATTTCATCGGTGGCCAGTT
CGTGCCGCCGGTGGACGGCCAGTACTTCAGCAACACCTCGCCGGTCAACGGTGAGGTGATCGCCGAATTCCCGCGCTCCA
CTGCCGCGGACATCGACAAGGCCCTGGACGCCGCCCATGCCGCCGCCGATGCCTGGGGCAAGACCAGCGCCCAGGACCGT
TCGCTGGTGCTGCTGAAGATTGCCGACCGCATCGAGCAGAACCTGGAGATCCTCGCGGTCAGCGAAACCTGGGACAACGG
CAAGGCCGTGCGCGAAACCCTCAACGCCGACGTGCCCCTGGCCGCCGATCATTTCCGCTACTTCGCCGGTTGCATCCGTG
CCCAGGAAGGCGGCGCCGCAGAGATCAACGAACTGACCACCGCCTACCATTTCCACGAACCCCTGGGCGTGGTCGGGCAG
ATCATCCCGTGGAACTTCCCGCTGCTGATGGCTGCCTGGAAACTCGCCCCGGCCCTGGCCGCCGGCAACTGCGTGGTGCT
CAAGCCCGCCGAGCAGACCCCGCTGTCGATCATGGTCTTCGCCGAGCTGATCGCCGACCTGCTGCCGGCCGGGGTGCTGA
ACATCGTCCAGGGCTTTGGCCGCGAAGCCGGCGAGGCCCTGGCCACCAGCAAGCGCATCGCCAAGATCGCCTTCACCGGC
TCGACCCCGGTGGGCTCGCACATCATGAAATGCGCCGCCGAGAACATCATTCCGTCCACCGTCGAACTGGGCGGCAAGTC
GCCGAACATCTTCTTCGAAGACATCATGCAGGCCGAACCCAAGTTCATCGAAAAGGCCGCCGAAGGCCTGGTGCTGGCGT
TCTTCAACCAGGGGGAAGTCTGCACCTGCCCATCCCGGGCCCTGGTCCAGGAGTCGATCTACGAGCCGTTCATGGCCGAG
GTGATGAAGAAGATCGTCAAGATCAAGCGCGGCAACCCGCTGGACACCGAGACCATGGTCGGCGCCCAGGCGTCGCAGCA
GCAGTACGAGAAGATCCTCTCCTACCTGCAGATCGCCCAGGAGGAGGGCGCCGAGCTGCTCACCGGTGGCGCCGCCGAGC
TGTTGGAAGGTGACCTGGCCAGCGGCTATTACATCCAGCCGACCCTGCTCAAGGGCCACAACAAGATGCGCGTGTTCCAG
GAAGAGATCTTCGGCCCGGTGGTGGGCGTGACCACCTTCAAGGACGAAGCCGAGGCCCTGGCGATCGCCAACGACAGCGA
GTTCGGCCTGGGCGCCGGGCTGTGGACCCGCGACATCAACCGCGCCTACCGCATGGGGCGGGCGATCAAGGCCGGCCGCG
TGTGGACCAACTGCTACCACCTGTACCCGGCCCACGCCGCGTTCGGTGGCTACAAGAAATCCGGGGTGGGCCGCGAGACC
CACAAGATGATGCTCGACCACTACCAGCAGACCAAGAACCTGCTGGTGAGCTACGACATCAATCCCCTGGGCTTTTTCTA
A

Protein sequence : 
MIYAQPGTPGAVVSFKPRYGNFIGGQFVPPVDGQYFSNTSPVNGEVIAEFPRSTAADIDKALDAAHAAADAWGKTSAQDR
SLVLLKIADRIEQNLEILAVSETWDNGKAVRETLNADVPLAADHFRYFAGCIRAQEGGAAEINELTTAYHFHEPLGVVGQ
IIPWNFPLLMAAWKLAPALAAGNCVVLKPAEQTPLSIMVFAELIADLLPAGVLNIVQGFGREAGEALATSKRIAKIAFTG
STPVGSHIMKCAAENIIPSTVELGGKSPNIFFEDIMQAEPKFIEKAAEGLVLAFFNQGEVCTCPSRALVQESIYEPFMAE
VMKKIVKIKRGNPLDTETMVGAQASQQQYEKILSYLQIAQEEGAELLTGGAAELLEGDLASGYYIQPTLLKGHNKMRVFQ
EEIFGPVVGVTTFKDEAEALAIANDSEFGLGAGLWTRDINRAYRMGRAIKAGRVWTNCYHLYPAHAAFGGYKKSGVGRET
HKMMLDHYQQTKNLLVSYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-140 67
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 5e-148 66
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 5e-148 66
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 5e-148 66
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-147 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldA1 YP_007999558.1 aldehyde dehydrogenase AldA VFG0082 Protein 6e-141 67