Gene Information

Name : arsB1 (PFLCHA0_c22340)
Accession : YP_007999509.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein ArsB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2478561 - 2479844 bp
Length : 1284 bp
Strand : -
Note : -

DNA sequence :
ATGTTTGTCGCTGTGGCTGTTTTTCTCTTCACCCTGATTCTCGTCATCTGGCAGCCCAAGGGCCTCGGCGTCGGTTGGAG
CGCCACGCTCGGCGCAATGATCGCGCTGGCGGTGGGCGCGGTATCGCTGCAGGACATTCCCACGGTGTGGGCCATTGTCT
GGAACGCCACCGCGACTTTCATCGCGGTGATCATCATCAGTCTGCTGCTGGACGAGGCCGGGTTCTTCGAATGGGCCGCC
CTGCATGTGGTGCGCTGGGCCAGGGGTAGCGGCCATCGGCTGTTCGCCTTCTGCGTGCTGCTGGGGGCGGCGGTGTCGGC
GCTGTTCGCCAATGACGGCGCAGCGCTGATCCTCACGCCCATCGTCATGTCGATGCTGCTGGCGCTGCGTTTTTCACCCG
GGGCGACCCTGGCCTTCGTCATGGCCGCGGGCTTCATTGCCGACACCGCGAGCCTGCCGCTGGTGGTGTCCAACCTGGTG
AATATCGTGTCCGCCGACTACTTCCGGCTGGGGTTCGCCGAGTACGCGGCGGTGATGCTGCCGGTGAGCCTGGCCAGTGT
CGCCATGACCTTGCTGGTGCTGTTCCTCTATTTCCGCAAGGACCTGCCGCCACGCTATGCCCTGGATGCGTTGCCGGAAC
CTTGCACGGCGATCCGTGACCGGGCCACCTTCAGGGTCGGGGGCTGGACCCTGCTGATGCTGCTGGTCGGGCTGTTCGCC
CTGGAGCCCCTGGGCATCCCCATCAGCGCCGTGGCGGCGGCCTGTGCCGCACTGCTGTTTGCCGTCGCCGCCAAGGGCCA
CCGGATCTCCACGCGCCGGGTGCTGCGCGAGGCGCCGTGGCAGATCGTGGTGTTCTCGCTGGGCATGTACCTGGTGGTGT
ACGGCCTGAAGAATGCCGGCCTGACGGACCTGCTGGCCCAGGTGCTGAACCGCCTGGCCGAACAGGGGCTGTGGAGCGCC
ACCCTGGGCACCGGCCTGCTGTCGGCGCTGCTGTCCTCGGTGATGAACAACATGCCCAGCGTGCTGATCGGCGCACTGTC
GATTCAGGCCAGCGAGGCGCAGGGGCTGGTACGCGAGGCGATGATCTACGCCAACGTCATCGGCTGCGACCTGGGCCCGA
AAATCACCCCCATCGGCAGCCTCGCCACGCTGCTCTGGCTGCACGTGCTGGAGCGCAAGGGCCTGCGCATCACCTGGGGG
TATTACTTCAAGGTCGGCGTGCTGCTGACCCTCCCGGTTCTGCTGGTCACCCTTTCGGCCCTGGCCCTGCGCCTGAGCCT
CTGA

Protein sequence :
MFVAVAVFLFTLILVIWQPKGLGVGWSATLGAMIALAVGAVSLQDIPTVWAIVWNATATFIAVIIISLLLDEAGFFEWAA
LHVVRWARGSGHRLFAFCVLLGAAVSALFANDGAALILTPIVMSMLLALRFSPGATLAFVMAAGFIADTASLPLVVSNLV
NIVSADYFRLGFAEYAAVMLPVSLASVAMTLLVLFLYFRKDLPPRYALDALPEPCTAIRDRATFRVGGWTLLMLLVGLFA
LEPLGIPISAVAAACAALLFAVAAKGHRISTRRVLREAPWQIVVFSLGMYLVVYGLKNAGLTDLLAQVLNRLAEQGLWSA
TLGTGLLSALLSSVMNNMPSVLIGALSIQASEAQGLVREAMIYANVIGCDLGPKITPIGSLATLLWLHVLERKGLRITWG
YYFKVGVLLTLPVLLVTLSALALRLSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 9e-130 73
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 9e-99 56
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 1e-95 55
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 1e-98 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB1 YP_007999509.1 arsenical pump membrane protein ArsB BAC0031 Protein 1e-125 73
arsB1 YP_007999509.1 arsenical pump membrane protein ArsB BAC0576 Protein 8e-128 72
arsB1 YP_007999509.1 arsenical pump membrane protein ArsB BAC0578 Protein 3e-127 72
arsB1 YP_007999509.1 arsenical pump membrane protein ArsB BAC0577 Protein 1e-122 71
arsB1 YP_007999509.1 arsenical pump membrane protein ArsB BAC0574 Protein 4e-98 55
arsB1 YP_007999509.1 arsenical pump membrane protein ArsB BAC0575 Protein 5e-98 55