Gene Information

Name : PFLCHA0_c20690 (PFLCHA0_c20690)
Accession : YP_007999354.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2284118 - 2285167 bp
Length : 1050 bp
Strand : +
Note : -

DNA sequence :
ATGAGCAGACGTAACCGCGGAAAACAGCTGGTAACCGCCAATGCCCCGAAAGAAGGGGAGCTGCTGCAGGCCGAGGCCGG
CCCGGTGGAGGCCTTCACCTTTGGGGACCCGATGCCGGTGCTGGATGGCCGCGAAATCCTCGACTACCTGCAGTGCTGGC
TCAATGGCCGCTGGTACGAAACGCCGATGTCCATGGATGGCCTGGCCAAGACCACCCGTGCCAGCGTGTATCTGCAATCG
GGGCTGAACTTCAAGCGCAACATGCTGGCCCGCACCTTCATCCCCCACAAGCTGCTCAGCCGACAGGCCTTCGAGCAGTT
CGCCCTGGACTGGCTCTGGTGCGGTAACTGCTACCTGGAGAAGCGCAACAACATGCTGCGCAACACCTTGGCACTGGTCC
CGCCGCTGGCCAAATACATGCGCCGCGGCGCCGATCTGGTGACCTACTACCAGGTGAGGGGCTGGAAGGACGAGCACGAA
TTCGCCCCAGGCTCCATCTGCCACCTGCGGGAGGCTGATATCAATCAGGAGATTTACGGCCTGCCGGAGTGGTTGGCGGC
GCTGCAAAGCGCACTGTTGAACGAGAGCGCCACGCTGTTCCGCCGCAAGTACTACAACAACGGCAGTCATGCGGGTTTCA
TCCTCTACATGACCGACGCGGCGCAGAAGGAAGAGGACATCGATTCGCTACGTGCCGCGCTGAAAAACTCGAAAGGCCCG
GGCAACTTCCGCAACCTGTTCGTCTACGCACCCGCCGGGAAGAAGGACGGCATCCAGCTGATCCCGGTCAGTGAGGTGGC
GGCAAAGGACGAGTTCAGCTCAATCAAGAACATCAGCCGCGACGATTTGCTCGCGGCCTTGCGCATTCCGCCACAGTTGA
TGGGCATCGTGCCGCAGAACGCGGGCGGTTTCGGGTCGTTGCGGGAGGCTGCTGAGGTTTGGGCGGTGAACGAGCTGGAG
CCGTTGCAGGCGCGCCTGGCCCAGGTCAATGAGTGGCTGGGTGAGGAGGTTGTCAGGTTCAGGGAGTTTGAGTTAAGCGC
GAGGGAGTAA

Protein sequence :
MSRRNRGKQLVTANAPKEGELLQAEAGPVEAFTFGDPMPVLDGREILDYLQCWLNGRWYETPMSMDGLAKTTRASVYLQS
GLNFKRNMLARTFIPHKLLSRQAFEQFALDWLWCGNCYLEKRNNMLRNTLALVPPLAKYMRRGADLVTYYQVRGWKDEHE
FAPGSICHLREADINQEIYGLPEWLAALQSALLNESATLFRRKYYNNGSHAGFILYMTDAAQKEEDIDSLRAALKNSKGP
GNFRNLFVYAPAGKKDGIQLIPVSEVAAKDEFSSIKNISRDDLLAALRIPPQLMGIVPQNAGGFGSLREAAEVWAVNELE
PLQARLAQVNEWLGEEVVRFREFELSARE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13463.1 predicted capsid packaging protein Not tested PAGI-6 Protein 3e-124 74
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 3e-97 59
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 3e-97 59