Gene Information

Name : ssuB1 (PFLCHA0_c02070)
Accession : YP_007997512.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Resistance
Product : aliphatic sulfonates import ATP-binding protein SsuB
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.-
Position : 243852 - 244667 bp
Length : 816 bp
Strand : -
Note : -

DNA sequence : 
ATGAACGCACCCCTGGTCAGTTTCACTCACGTGGGCAAGACCTTCGCCGTCGCCGGTGGCGAGGTGGAGGCGATCCGCGA
ATTCAACCTGGACATCGCCGAAGGCGAGTTCGTCGCCATCGTCGGTTCCAGCGGTTGCGGCAAGTCCACCCTGCTGCGCC
TGCTGATCGGCCTGGACACCGAGTTTCGTGGCCAGATCCGGGTCGACGGCAAGGCCGTCAGCGGCATCGGCGGCGAGCGC
GGCATCGTGTTCCAGGAACACCGCCTGTTCCCCTGGCTGACGGTGGCCGAGAACATCGGCCTGGGCCTGGTCAACGAGCC
CCTGAGCGCCGCCGAGCGCCAGCAACGGGTCGGCGAATTCATCGAACTGGTGGGCCTCAAGGATTTCACCCGGGCCTATC
CCCACCAACTGTCCGGCGGTATGGCGCAACGAGTGGCCATTGCCCGGGGGCTGGTAGCCAGCCCGCGGATCCTGCTGCTG
GACGAACCCTTCGGCGCCCTCGACGCCCTGACCCGCCAACAGATGCAGGACGAACTGCTGGCGATCCGCGAGCGGGCCAA
GATCACCACGGTGCTGGTGACCCACGATGTCGAGGAAGCGATTTTCCTCGCCGACCGGGTGGTGGTGATGGAACCGCGCC
CGGGGCGGATCAAGCGCGTGGTCGAGGTGGCCCTGCCCCACCCGCGCCAGCGCAGCAGTTTCGACTTCCACCAACTGCGT
GAGGAGCTGCTTCACGAACTGACCCGCGACGAGCTCTACCAGGCGCCTTCGCCGGTACAGATCCGCGACCTGCCCCTGAC
CTTCATTGCTTGCTGA

Protein sequence : 
MNAPLVSFTHVGKTFAVAGGEVEAIREFNLDIAEGEFVAIVGSSGCGKSTLLRLLIGLDTEFRGQIRVDGKAVSGIGGER
GIVFQEHRLFPWLTVAENIGLGLVNEPLSAAERQQRVGEFIELVGLKDFTRAYPHQLSGGMAQRVAIARGLVASPRILLL
DEPFGALDALTRQQMQDELLAIRERAKITTVLVTHDVEEAIFLADRVVVMEPRPGRIKRVVEVALPHPRQRSSFDFHQLR
EELLHELTRDELYQAPSPVQIRDLPLTFIAC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 3e-50 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-24 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-24 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssuB1 YP_007997512.1 aliphatic sulfonates import ATP-binding protein SsuB NC_008702.1.4606598. Protein 1e-24 42