Gene Information

Name : PFLCHA0_c20470 (PFLCHA0_c20470)
Accession : YP_007999332.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Unknown
Product : phage tail tape measure protein, TP901 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2265392 - 2268013 bp
Length : 2622 bp
Strand : -
Note : -

DNA sequence :
ATGGCGAATGACCTCAAACTTCAGGTGCTACTCAACGCCATCGACAGGGCCACCGGCCCCCTGAAGTCGATCAACAAGAG
CAGCATCGGCGCTGCGCGAGCATTGAAGGATGCCCGGGACAACCTCAAGCAACTCAACGCGCAGCAGAAAGACATCAGCG
CCTGGCGCACCCAGCGAGCAGCCGCAGAGCAGACCGAGCAGGCTCTCGGCGCCGCCCGTGATCGCGTGCGAGCGCTCAGC
CAGCAGTTCGCTGCCACCGGTGCGCCGACCCAGGCCATGACCCGGGATATGCGTTCAGCGATCCGAGAGGCGCAGCGGCT
CAAGCAACAACACCAGCAACAGGGCGAGCAGCTCCAGGGCTTGCGCACGAAGCTCTACGACGCCGGCATCAGCACCCGCA
ACCTCGGGCAAGCTGAGCGTGACTTGCGCAGCAAAATCACCCAGACCAACCAGACCATAGGGCAGCAGGAAGCCAAACTC
AGGCGTCTGGCCGGGCAGCAACGACAGCTCGTTAATGCGAAGAGGAGTTACGAGAAGGCTCAAAGCGTATCCGGAGGGAT
GGCTGCAAGCGGCGCCGCTGGGCTTGGTGCCGGCTATGCCCTGAGCAGGCCGTTGAAGGCAGCAGTAGACGCCTTCGCTC
CGGCAGAGAACGCCGCGACCCAGCTGAAGGTGTCGATGATGGCGCCGGACGGCTCCATTGCTGCCGAGTTCGAAAAAATG
ACGACCCTGGCCACGCAGCTCGGTGACCGCCTGCCCGGCACCACTGCCGACTTCCAGGAAATGATGACAATGCTCCGGCG
CCAGGGGCTAACGGCGACCAACATCCTCGGTGGTACCGGCGAGGCTGCTGCGTATCTGGGCGTTCAGTTGCAGATGCCGG
TGACCGCCGCCGCAGAGTTCGCGGCGAAAATGCAGGACGCCACAAGGACCACCGAAGGCGACATGATGGCGCTGATGGAT
ACCATCCAGCGCACCTATTACCTGGGCGTCGACAGCGGCAACATGCTGCAGGGCTTCAGCAAGATCTCCCCGGTGATGGA
CATCATCAAGAAACAGGGCCTGGAAGCGAGCAAGGTTCTCACTCCCCTGCTGGTGATGATGGATCAGGCCGGTATGGAAG
GCGGCGCGGCGGGTAACGCCTACCGGAAGATTTTCCAGGGCGCGATGGCCAACGCAAAAATCCAGAAGTTACTGGATGAC
CTGAAGGCCGAACGCGGGATCTCGCTGAAGCTCGACTTCACCGACGGCAAAGGCGAGTTCGGCGGCATCGAGAAGATGTA
TGCCCAGCTGGAGAAGCTCAAGGGCTTGAACACCGAGGTTCGCCTCGACCTGATCAAAAGCATGTTCGGCGACGACAGCG
AGACTCTCACCACCCTCAACACCATGATGGCCAAGGGCATTGCCGGTTATCGCGAAGTCGAGGGCAAGATGCAGACCCAA
GCCGACCTGCGGACCCGAGTGAACGTGCAGCTGTCGACGCTGGCAAACGTTCTGGAAGCCGCCGAGGGTAGCTGGACCAA
CGCCATGGCCGACGTTGGCAATGTGATGGCCCCAGAACTGAAGGAGCTCATCCAGTCGCTGGGAGAAGTGGCAAACCGTG
TGGGCGCCTGGGTGAAGGCCAACCCCGAGTTGACCCGCCAGATCGCCAAGACCGTCGCCGGCATCGCCTTACTGATGACC
ATCATGGGCGGCCTCAGCATCGGCCTGGCAAGCATGATTGGTCCCTTCGCCATGGTGCGCTACGCCCTGACCTTGTTCGG
CATCAAGGGCAGCGGCGCCCTCGGCCTGATTGGCCAGGGAGTCCGCGTGCTGGCGATGGCCCTGGGCGGTCCGCTGATCG
CGGCTCTGCGCACGGTCAGCATTGCTATGTGGGGGCTCGCGGCAAACCCGGTGGTACTGGCAATCGCTGCCGTCGTGGCT
GTCCTCGCAGGTGCCGCTTACTTGATCTACAAGAACTGGGACGCGGTGAAGGCCTATGTCATCAGCCTCTGGAACGAGAT
CAAAGCCGGGTTCGACGGAGGCATTGGAGGCATCTTGACCGTCCTGGCCAACTTCAGCCCCATCGGGATCATCTACCGGG
CATTCGCCGAGGTCCTGAACTACCTGGGCCTCGATCTCCCGACCCAGTTCACCGAGTTCGGCAACATGATCGTCAATGGC
CTGGTGAATGGCCTCCTCGCCGGCATGGGCAAGGTGAAAGAGACCATCGGCGCGATCGGCGATTCAACCATTGGATGGTT
CAAGGAAAAGCTCGACATCCACAGCCCGTCGCGGGTGTTCGCCGAACTCGGCGGCTTCACCATGGAAGGGCTGACCCAAG
GACTGCAGGCCGGCCAGAAAGGCCCGCTGAACGCGGTGAACAACCTCGGTCAGCAGCTCGCCATGGCAGGCAGCATGGGC
CTGGGCGTTGCTGCCATGCCCGGCCTCTCGGTCGATACGCGCGCCCCCATCAGCCCAGCTGCTGCGGCCACCTACGACAG
CCACGACACCTACGAAATCAACATCCACCCCACGCCTGGCATGGATGCCTTGGCAATCGGCCGCGCCGTGCGGGCAGAAC
TTGCGCGCATTGAAAGCGAAAAAGGCGCCCGCAAGCGCAGCCAACTGTCCGACCTGGAGTAA

Protein sequence :
MANDLKLQVLLNAIDRATGPLKSINKSSIGAARALKDARDNLKQLNAQQKDISAWRTQRAAAEQTEQALGAARDRVRALS
QQFAATGAPTQAMTRDMRSAIREAQRLKQQHQQQGEQLQGLRTKLYDAGISTRNLGQAERDLRSKITQTNQTIGQQEAKL
RRLAGQQRQLVNAKRSYEKAQSVSGGMAASGAAGLGAGYALSRPLKAAVDAFAPAENAATQLKVSMMAPDGSIAAEFEKM
TTLATQLGDRLPGTTADFQEMMTMLRRQGLTATNILGGTGEAAAYLGVQLQMPVTAAAEFAAKMQDATRTTEGDMMALMD
TIQRTYYLGVDSGNMLQGFSKISPVMDIIKKQGLEASKVLTPLLVMMDQAGMEGGAAGNAYRKIFQGAMANAKIQKLLDD
LKAERGISLKLDFTDGKGEFGGIEKMYAQLEKLKGLNTEVRLDLIKSMFGDDSETLTTLNTMMAKGIAGYREVEGKMQTQ
ADLRTRVNVQLSTLANVLEAAEGSWTNAMADVGNVMAPELKELIQSLGEVANRVGAWVKANPELTRQIAKTVAGIALLMT
IMGGLSIGLASMIGPFAMVRYALTLFGIKGSGALGLIGQGVRVLAMALGGPLIAALRTVSIAMWGLAANPVVLAIAAVVA
VLAGAAYLIYKNWDAVKAYVISLWNEIKAGFDGGIGGILTVLANFSPIGIIYRAFAEVLNYLGLDLPTQFTEFGNMIVNG
LVNGLLAGMGKVKETIGAIGDSTIGWFKEKLDIHSPSRVFAELGGFTMEGLTQGLQAGQKGPLNAVNNLGQQLAMAGSMG
LGVAAMPGLSVDTRAPISPAAAATYDSHDTYEINIHPTPGMDALAIGRAVRAELARIESEKGARKRSQLSDLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13488.1 phage-related tail protein Not tested PAGI-6 Protein 1e-109 42