Gene Information

Name : lolD (PFLCHA0_c20170)
Accession : YP_007999302.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Resistance
Product : lipoprotein-releasing system ATP-binding protein LolD
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.-
Position : 2241652 - 2242335 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTGAAAAAGCAATCCTGAGCTGCCGCGACCTGGGCAAGTCCTATGAGGAAGGCCCGGAATCGGTGGTGGTCCTGTC
TGGCCTGCAACTGGAGCTGCACCCGGGTGAGCGAGTGGCCATCGTCGGCACTTCCGGCTCGGGCAAGAGTACCTTGCTCA
ACCTGCTGGGCGGCCTGGATACGCCATCCAAGGGCAGCGTCTGGCTGGCGGGCGAGGAGCTTTCTGCGCTGGGCGAGAAG
GCCCGCGGCCAGTTGCGCAACCGCGCCCTGGGCTTCGTCTACCAGTTCCACCACCTGCTGCCGGAGTTCACCGCGCTGGA
GAACGTCTGCATGCCGCTGCTGATTGGCCGCACGCCGATCCCGGAAGCCCGTCAGCGTGCCACCGCGCTGCTGGAGCGGG
TCGGGCTCGGCCATCGGCTGGAGCACAAACCGGCCGAGCTGTCCGGTGGCGAGCGCCAGCGGGTGGCCATTGCCCGGGCG
CTGGTGAACAAGCCGGGGCTGGTGATGCTCGATGAGCCCACCGGCAACCTCGACTCGCACACGGCCCAGGGAATTCAGGA
CCTGATGCTGGAGCTCAGTACCTCGATGCGCACCGCCTTCCTGGTGGTGACCCACGACATGAACCTGGCTCGACAGATGG
ACCGCGTACTGCACCTGCAAGAAGGTCACCTGGTCGCTATCTGA

Protein sequence : 
MSEKAILSCRDLGKSYEEGPESVVVLSGLQLELHPGERVAIVGTSGSGKSTLLNLLGGLDTPSKGSVWLAGEELSALGEK
ARGQLRNRALGFVYQFHHLLPEFTALENVCMPLLIGRTPIPEARQRATALLERVGLGHRLEHKPAELSGGERQRVAIARA
LVNKPGLVMLDEPTGNLDSHTAQGIQDLMLELSTSMRTAFLVVTHDMNLARQMDRVLHLQEGHLVAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-28 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_007999302.1 lipoprotein-releasing system ATP-binding protein LolD NC_012469.1.7686878. Protein 5e-39 43
lolD YP_007999302.1 lipoprotein-releasing system ATP-binding protein LolD NC_008702.1.4606598. Protein 1e-32 43