|
Name : kdsB (PFLCHA0_c18170) Accession : YP_007999103.1 Strain : Pseudomonas fluorescens CHA0 Genome accession: NC_021237 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase KdsB Function : - COG functional category : - COG ID : - EC number : 2.7.7.38 Position : 2002555 - 2003319 bp Length : 765 bp Strand : + Note : - DNA sequence : ATGAGCAGCGCCTTTACCGTTGTCATTCCGGCGCGCTACGCCTCCACTCGCCTGCCAGGCAAGCCGCTGCAACTGATCGC CGGCAAGCCGATGATCCAGTGGGTCTGGGAACAGGCGCGCAAGAGCAGCGCCGAGCGGGTCGTGGTGGCCACCGATGATC AGCGCATCGTCGAGGCCTGCCAGGGCTTTGGCGCCGAGGCGCTGCTGACCCGGGAAGATCACAACTCCGGCACCGACCGG CTGGCGGAAGTTGCCGCCCAGCTGGGCCTGGCCGCGGATGCGATCGTGGTCAACGTACAAGGCGACGAGCCGTTGATCCC GCCGTCGGTGATCGATCAGGTGGCGGCCAACCTGGCAGCCCACACCGAAGCGCGCATGGCCACCCTGGCCGAGCCGATCG AGGACGTGCAGACCCTGTTCAACCCCAATGTGGTCAAGGTGGTCAGCGACCTCAACGGCCTGGCCCTGACCTTCAGTCGC GCCACCTTGCCCTGGGCCCGGGATGCCTTTGCCCAGAGTCGTGAGCAACTGCCCGAAGGCGTGCCTTATCGCCGTCACAT CGGCATCTATGCCTACCGCGCCGGCTTTCTTCACGACTTCGTCAGTTGGGGCCCGTGCTGGCTGGAAAACACCGAATCCC TGGAGCAACTGCGTGCCCTGTGGCATGGCGTGCGGATCCACGTGGCCGACGCCCTGGAAGCACCGCCTACCGGCGTCGAT ACCGCCGAAGACCTTGAGCGCGTTCGGCGCCTGCTGGAGGCCTGA Protein sequence : MSSAFTVVIPARYASTRLPGKPLQLIAGKPMIQWVWEQARKSSAERVVVATDDQRIVEACQGFGAEALLTREDHNSGTDR LAEVAAQLGLAADAIVVNVQGDEPLIPPSVIDQVAANLAAHTEARMATLAEPIEDVQTLFNPNVVKVVSDLNGLALTFSR ATLPWARDAFAQSREQLPEGVPYRRHIGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWHGVRIHVADALEAPPTGVD TAEDLERVRRLLEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 7e-38 | 43 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 2e-37 | 43 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 5e-38 | 43 |
