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Name : lysS (PFLCHA0_c11580) Accession : YP_007998454.1 Strain : Pseudomonas fluorescens CHA0 Genome accession: NC_021237 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase LysS Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1311085 - 1312587 bp Length : 1503 bp Strand : + Note : - DNA sequence : ATGAGCGACCAACAACTCGACCCGCAAGCCCTGCAACAGGAAGAAAACTCCCTGATCGCCCTGCGCAAGGAAAAGCTTGC TGCCGAGCGCGCCAAGGGCAATGCCTTCCCGAACGACTTCCGCCGCGAAAACTACTGCGAAGATCTGCAGAAGAAATACG CGGACAAGACCAAGGAAGAGCTCGCAGAGGCTGCAATCCCGGTCAAGGTTGCCGGTCGCATCATGCTCAACCGTGGCTCG TTCATGGTGATCCAGGACATGACCGGTCGCATTCAGGTCTACGTCAACCGTAAAACCCTGTCCGAAGAAACCCTGGCCTC CGTCAAGACCTGGGACATGGGCGACATCATCGCTGCCGAAGGCACTCTGGCCCGTTCCGGCAAGGGTGACCTGTACGTTG AAATGACCAATGTGCGCCTGCTGACCAAGTCGCTGCGCCCGCTGCCGGACAAGCACCACGGCCTGACCGACACCGAGCAG CGCTACCGTCAGCGCTACGTCGACCTGATCGTCAACGAAGAAGTACGCCAGACTTTCCGCGTGCGTTCGCAAGTGATCGC CCACATCCGCAGCTTCCTGATGAAGCGCGACTTCCTCGAAGTCGAAACGCCGATGCTGCAGACCATCCCTGGCGGCGCTG CGGCCAAGCCGTTTGAAACCCACCACAACGCGCTGGACATGGAAATGTTCCTGCGTATCGCCCCTGAACTGTATCTGAAG CGCCTGGTGGTTGGCGGTTTCGAGAAAGTGTTCGAGATCAACCGCAACTTCCGTAACGAAGGTGTTTCGACCCGTCACAA CCCTGAATTCACCATGTTGGAGTTCTACCAGGCTTACGCCGACTATGAAGACAACATGGACCTGACCGAAGAACTGTTCC GCGAACTGGCGCAGTTGGTCCTGGGCAGCACCGACGTGCCGTACGGCGACAAGGTGTTCCACTTCGGCGAGCCGTTCGCG CGCCTGTCGGTGTTCGACTCGATCCTCAAGTACAACCCCGAACTGACCGCTGATGACCTGAACGACATCGACAAGGCTCG CGCCATCGCCAAGAAGGCCGGTGCCAAGGTGCTGGGCTTCGAAGGCCTGGGCAAGTTGCAGGTGATGATTTTCGAGGAAC TGGTGGAGCACAAGCTGGAGCAGCCGCACTTCATTACCCAGTACCCGTTCGAAGTGTCGCCGCTGGCCCGTCGCAACGAC GATAACCCCAACGTCACCGACCGTTTCGAGCTGTTCATTGGTGGTCGCGAAATCGCCAACGCCTACTCCGAGTTGAACGA CGCGGAAGACCAGGCAGAGCGCTTCATGGCCCAGGTGGCGGACAAGGACGCCGGTGATGACGAAGCCATGCACTACGACG CCGACTTCGTCCGTGCCCTGGAATACGGCATGCCGCCCACCGCCGGCGAGGGCATCGGTATCGACCGCCTGGTGATGTTG CTGACCAACTCGCCGTCGATTCGCGATGTGATCCTGTTCCCGCACATGCGGCCGCAAGCTTAA Protein sequence : MSDQQLDPQALQQEENSLIALRKEKLAAERAKGNAFPNDFRRENYCEDLQKKYADKTKEELAEAAIPVKVAGRIMLNRGS FMVIQDMTGRIQVYVNRKTLSEETLASVKTWDMGDIIAAEGTLARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQ RYRQRYVDLIVNEEVRQTFRVRSQVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLK RLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVPYGDKVFHFGEPFA RLSVFDSILKYNPELTADDLNDIDKARAIAKKAGAKVLGFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARRND DNPNVTDRFELFIGGREIANAYSELNDAEDQAERFMAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVML LTNSPSIRDVILFPHMRPQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 6e-134 | 59 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-77 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_007998454.1 | lysyl-tRNA synthetase LysS | VFG1668 | Protein | 4e-134 | 59 |
