Gene Information

Name : hom1 (PFLCHA0_c11230)
Accession : YP_007998419.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Unknown
Product : homoserine dehydrogenase Hom
Function : -
COG functional category : -
COG ID : -
EC number : 1.1.1.3
Position : 1264142 - 1265446 bp
Length : 1305 bp
Strand : +
Note : -

DNA sequence :
GTGAATCCGGTCAAAGTAGGCATCTGTGGGCTGGGTACTGTCGGTGGCGGTACCCTAAACGTACTTCAGCGCAACGCCGA
GGAGATTGCCCGCCGTGCCGGGCGTGGAATCGAAGTAGCGCAGATTGCTACCCGTACGCCAAAGCCGCAGTTCCAAACGA
CCGGTATTGCGATTACCAACGATGTCTTCGCCGTGGCCACCAACCCTGAAATCGATATCGTCATCGAGCTGGTGGGCGGC
TACACCGTGGCCCGTGACCTGGTGCTCAAGGCCATCGAGAACGGCAAGCACGTGGTCACCGCGAACAAGGCGCTGATCGC
CGTGCACGGCAACGAAATCTTCGCCAAGGCCCAGGAGAAGGGCGTGATCGTCGCTTTCGAAGCCGCCGTTGCCGGTGGCA
TCCCGGTGATCAAGGCGATCCGCGAAGGCCTCTCGGCCAACCGTATCAACTGGCTGGCGGGGATCATCAACGGCACCGGC
AACTTCATCCTCTCGGAAATGCGCGAGAAGGGCCGCACCTTTGAAGACGTGCTGGCCGAAGCCCAGGCCCTGGGCTACGC
CGAAGCCGACCCGACCTTCGACGTCGAAGGCATCGATGCCGCGCACAAGCTGACCATCCTGGCCTCCATCGCCTTTGGTA
TCCCGCTGCAGTTCGACAAGGCCTACACCGAAGGCATCACCAAGCTCACCACCGCCGACGTGAACTACGCCGAGGCCCTG
GGCTACCGCATCAAGCACCTGGGTGTGGCGCGCCGCACCGAGGCCGGTATCGAGCTGCGGGTGCACCCGACCCTGATTCC
GGCCGATCGCCTGATCGCCAACGTCAACGGTGTGATGAACGCGGTCATGGTCAATGGCGATGCCGCCGGTTCGACCCTGT
TCTACGGCGCCGGCGCGGGCATGGAGCCGACCGCTTCCTCGGTGGTGGCCGACCTGGTGGACGTGGTTCGCGCCATGACC
AGCGACCCGGAAAACCGCGTGCCGCACCTGGCGTTCCAGCCTGACTCGCTGTCGGATCATCCGATCCTGCCGATCGAGTC
CTGCGAGAGCGCCTACTACCTGCGCATCCAGGCCAAGGATCACCCGGGCGTACTGGCCCAGGTGGCGAGCATCCTCTCGG
AGCGCGGCATCAACATCGAATCGATCATGCAGAAGGAAGTGGAAGAGCAGGACGGCCTGGTGCCGATGATCCTGCTGACC
CACCGTGTTCTGGAGCAGCACATCAACGATGCGATCACCGCCCTGGAGGCCCTGCAGGGCGTCGTTGGCCCGGTGGTGCG
TATCCGCGTCGAACATTTGAATTAA

Protein sequence :
MNPVKVGICGLGTVGGGTLNVLQRNAEEIARRAGRGIEVAQIATRTPKPQFQTTGIAITNDVFAVATNPEIDIVIELVGG
YTVARDLVLKAIENGKHVVTANKALIAVHGNEIFAKAQEKGVIVAFEAAVAGGIPVIKAIREGLSANRINWLAGIINGTG
NFILSEMREKGRTFEDVLAEAQALGYAEADPTFDVEGIDAAHKLTILASIAFGIPLQFDKAYTEGITKLTTADVNYAEAL
GYRIKHLGVARRTEAGIELRVHPTLIPADRLIANVNGVMNAVMVNGDAAGSTLFYGAGAGMEPTASSVVADLVDVVRAMT
SDPENRVPHLAFQPDSLSDHPILPIESCESAYYLRIQAKDHPGVLAQVASILSERGINIESIMQKEVEEQDGLVPMILLT
HRVLEQHINDAITALEALQGVVGPVVRIRVEHLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00305 YP_008207770.1 Homoserine dehydrogenase Not tested AbaR25 Protein 2e-110 59
BJAB0868_00309 YP_008211635.1 Homoserine dehydrogenase Not tested AbaR26 Protein 2e-110 59