Gene Information

Name : xerD1 (PFLCHA0_c11210)
Accession : YP_007998417.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1262230 - 1263126 bp
Length : 897 bp
Strand : +
Note : -

DNA sequence :
ATGCCTGCCATCGACCACCCCCTGATCGACCGTTTTCTCGACGCCCTGTGGTTGGAGAAAGGCCTGTCCGACAACACGCG
CGACGCCTATCGCAGTGACCTGGCGTTGTTCAACGGCTGGTTGCAGGAGCAGGGGCTGGAGTTGCCGCGGGCCGGGCGCG
AGCTGATCCTCGATCACCTGGCCTGGCGCGTGGAGCAAGCCTACAAGCCCCGCTCGACAGCGCGATTCCTCTCGGGCGTG
CGTGGTTTCTATCGCTATCTGCTGCGGGAAAAGCTGATTGAAATCGATCCAACCTTGCAGATCGACATGCCGCAACTGGG
GCGTCCGTTGCCCAAGTCGCTGTCGGAGGCGGATGTGGAAGCGCTGCTGGCCGCGCCGGACCTGAGCGAGGCCATCGGCC
AGCGCGACCGGGCCATGCTCGAAGTGCTCTATGCCTGCGGCCTGCGGGTTACCGAGTTGATCAGCCTGACCCTGGAGCAG
GTCAACCTGCGCCAGGGCGTGCTGCGGGTCATGGGCAAGGGCAGCAAGGAGCGCCTGGTGCCCATGGGCGAGGAGGCGAT
TGTCTGGGTCGAGCGCTACATGCGTGATGCCCGTGCCGAGCTGCTGGGCGGGCGTCCCAGCGACGTGCTGTTCCCCAGCC
TGCGTGGCGAGCAGATGACCCGCCAGACCTTCTGGCATCGGATCAAGCACCAGGCCAAGGTCGCCGGGATCGGCAAGGCG
CTGTCGCCCCACACCTTGCGCCATGCCTTCGCTACCCATCTGCTCAATCACGGCGCCGACCTGCGAGTGGTGCAGATGCT
GTTGGGCCATAGCGATCTGTCCACCACCCAGATCTATACCCATGTGGCCCGCGCCCGGCTGCAGGATCTGCACGCCAAGC
ACCATCCGCGCGGTTGA

Protein sequence :
MPAIDHPLIDRFLDALWLEKGLSDNTRDAYRSDLALFNGWLQEQGLELPRAGRELILDHLAWRVEQAYKPRSTARFLSGV
RGFYRYLLREKLIEIDPTLQIDMPQLGRPLPKSLSEADVEALLAAPDLSEAIGQRDRAMLEVLYACGLRVTELISLTLEQ
VNLRQGVLRVMGKGSKERLVPMGEEAIVWVERYMRDARAELLGGRPSDVLFPSLRGEQMTRQTFWHRIKHQAKVAGIGKA
LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVARARLQDLHAKHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-66 54
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-66 54