Gene Information

Name : ribD1 (PFLCHA0_c10520)
Accession : YP_007998348.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.4.26
Position : 1190937 - 1192043 bp
Length : 1107 bp
Strand : -
Note : -

DNA sequence :
ATGACCTACTTCAGCGAAGTCGACTTCCAGCACATGCAGCACGCCCTGTCCCTGGCAGAACGGGGCAGCCACTCCACCTG
GCCCAATCCGCGGGTAGGTTGCGTGATCGCCCATGGCTCGCAAGTGGTCGGCGAAGGCTGGCATCGGCGGGCCGGCGGGC
CCCACGCCGAGGTGTTCGCCCTGCGCCAGGCCGGTGGCCTGGCGCGGGGTGCCACCGCCTACGTGACCATGGAACCCTGC
AGCCATGTCGGACGCACCGGTGCCTGCCATCAGGCCCTGATCGACAGCGGCGTGCACAGCGTGGTGGTGGCCCATCAGGA
CCCGTTCGAACAGGTCAACGGCCAGGGCATCGCCCAACTGCGTAACGCCGGAATCGAGGTGCGGGTCGGCCTGCTGGAAT
CGGCGGCCCAGGAGTTGAACCGCGGCTTTCTGTCCACGGTGCGGCGCCAGCGGCCCTGGGTGCAACTGAAAATGGGCATG
AGCCTGGACGGGCGCACGGCCCTGGACAATGGGCGCTCGAAGTGGATCACCAGCACCCGGGCCCGGGCCGACGTGCAGTA
TTGGCGGGCCCGCAGCTCGGCGATCCTCACCGGCAGCGGTACCGTCCTGGCGGACGACCCACTGCTCACGGTACGCCAGC
TGTCCTCCCCGGAGGCCCTGGCGCCAGTACGTGTGGTGCTCGACAGCCAGGGCCGGGTGCCCGCCACGGCGCGGGTGTTC
AACGACCAGGCGCCGAGCCTGCACGTGGTGCACCGGGAGTGCCCGCTGGCCAGCAGCGACAGCGAGCAGGTCATGGCGCT
GCCCGGGGACGACCAGGGCCTGCACCTTGAGCAGTTGCTGCACAACCTCAGCCAGCGCGGCCTGCACGACCTGCTGGTGG
AAGCCGGCCCGACACTGGCCGGCAACCTGCTCAAGGCGCATCTGGTGGATGAGTTGCTGTTGTACGTGGCTCCGCGCCTG
CTGGGGGATCTGGCCCGGCCGCTGGTGCACCTGCCGTGCTTCGACCGCCTGGAGGAGGCCCTGGACTTTGCCCTGTATGA
CGTCAGCCAGCTGGGGCCGGACCTGCGTCTGCGCCTGCGGCCGGCTCAGCCGCCGAGCGCGCTATGA

Protein sequence :
MTYFSEVDFQHMQHALSLAERGSHSTWPNPRVGCVIAHGSQVVGEGWHRRAGGPHAEVFALRQAGGLARGATAYVTMEPC
SHVGRTGACHQALIDSGVHSVVVAHQDPFEQVNGQGIAQLRNAGIEVRVGLLESAAQELNRGFLSTVRRQRPWVQLKMGM
SLDGRTALDNGRSKWITSTRARADVQYWRARSSAILTGSGTVLADDPLLTVRQLSSPEALAPVRVVLDSQGRVPATARVF
NDQAPSLHVVHRECPLASSDSEQVMALPGDDQGLHLEQLLHNLSQRGLHDLLVEAGPTLAGNLLKAHLVDELLLYVAPRL
LGDLARPLVHLPCFDRLEEALDFALYDVSQLGPDLRLRLRPAQPPSAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-61 48
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-61 48