Gene Information

Name : ssb1 (SLY_0891)
Accession : YP_007997085.1
Strain : Candidatus Phytoplasma australiense NZSb11
Genome accession: NC_021236
Putative virulence/resistance : Unknown
Product : Single-strand binding protein 1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 771543 - 771977 bp
Length : 435 bp
Strand : -
Note : -

DNA sequence :
ATGATTAATAAAGTTATTTTAGTTGGAAGAATTACTAAAGACCCTGAATTAAAATCTTATAATGGGGAAGTTAATTATGT
TAAATTTACCTTAGCAGTAAATAGATTTTATAACAATCAAGAAGAAAATAAAAAAACTGATTTCATTAATTGCATCGTTT
GGCGTAAACAAGCGGAAAATTTGAGTAAATACATCTTTAAAGGTAATTTATTAGGAGTTGAAGGAAGCATTCGAGTAGAA
AAATGGGAAAAAGATAATAAAACCAATTGGTCTACTGAAATTCTTTGCAATAACATTTCTTTTTTAGAATCCAAGAAAAG
TTTGAACGCAACACAAGAAAAAGACTATCAATCAAATAATGACTCAAGTTTTGAAAATTCACAATCTAATGATTTTGAAA
CAAATACACCAGAAGATGATGGATTACCCTTTTAA

Protein sequence :
MINKVILVGRITKDPELKSYNGEVNYVKFTLAVNRFYNNQEENKKTDFINCIVWRKQAENLSKYIFKGNLLGVEGSIRVE
KWEKDNKTNWSTEILCNNISFLESKKSLNATQEKDYQSNNDSSFENSQSNDFETNTPEDDGLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 3e-20 48
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 4e-20 47
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 2e-20 47
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 1e-20 46
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 6e-19 43