Gene Information

Name : LBFF_0889 (LBFF_0889)
Accession : YP_007995066.1
Strain : Lactobacillus fermentum F-6
Genome accession: NC_021235
Putative virulence/resistance : Unknown
Product : putative integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 937538 - 938161 bp
Length : 624 bp
Strand : -
Note : -

DNA sequence : 
ATGAAGGAACTGGATATCCACTCCGTTACCGTCAATAAATGGAAAGCGGCTTCGGCTTCCCAAACCAAGGTTGAACAGCG
TCCCAACTTGCTTAAGCAGGATTTCTCGACCACTGGTTTAAATCAAAAATGGACCGCTGATATGACCTATATTCAAACGA
AGCGTAATGGCTGGTGTTACTTATCAACCATCATGGATCTGCACTCAAGACGAATTATCGGCTATTCATTCTCAAAAAAG
ATGGATACTGATTTAGTCTTAAAGACCCTGGAAAGCGCGGTTAAAAATCGAACCATTACTGGGAACCTGATTATCCACAC
AGACTTAGGATCACAGCACACCAGCGATGATTACAACCAACGGTTAACAGAACTACATATCCGCCACTCCTACAGCCGTA
AGGGGTGTCCATACGATAATGCACCAATGGAATCTTTTCATGCTTCCCTCAAAAAGGAATGTGTTTATCCAGTGCCGGTC
TTTGAGAATTATGAAACTGCCGCTGCTGTCCTTTTTGAATATGTGCATGCTTTCTACAATAGGAAGAGAATTCATAGTTC
ACTGGGCTACCAGACCCCCTTACAAGTTGAAATCGCAACACTTACGAGCCAAATGGCCGCCTGA

Protein sequence : 
MKELDIHSVTVNKWKAASASQTKVEQRPNLLKQDFSTTGLNQKWTADMTYIQTKRNGWCYLSTIMDLHSRRIIGYSFSKK
MDTDLVLKTLESAVKNRTITGNLIIHTDLGSQHTSDDYNQRLTELHIRHSYSRKGCPYDNAPMESFHASLKKECVYPVPV
FENYETAAAVLFEYVHAFYNRKRIHSSLGYQTPLQVEIATLTSQMAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 7e-26 41
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 5e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LBFF_0889 YP_007995066.1 putative integrase VFG1706 Protein 2e-26 41