Gene Information

Name : LBFF_0855 (LBFF_0855)
Accession : YP_007995032.1
Strain : Lactobacillus fermentum F-6
Genome accession: NC_021235
Putative virulence/resistance : Resistance
Product : Cystathionine beta-lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 899923 - 901119 bp
Length : 1197 bp
Strand : +
Note : -

DNA sequence : 
ATGACTAAACTTGATACCCAGCTGGTGCACGGGCCAGCCGTTAATGACAACTGTACCGGCGCCGTGACCACGCCGATTTA
CAAGGCAACAACCTTTGAATACCCCGAAATTGGGGCGCCGGTGACCTACGATTACTCGCGCTCGGGGAACCCGACCCGCC
AGGCGGTCGAAAATCAACTGGCGACCTTGGAAGGGGGCCAGCGGGCCTTCACCTTTGCCTCCGGGATGGCCGCTATCCAC
GCCGCCCTGGCGATCTTTAAGGCCGGCGACCACCTGATCGTGGGTGACCAAATTTACGGCGGCACCTTCCGCTTGCTTTA
CCAATTTTTCGCCCGCTGGGGGCTTAAAATCACGGCGGTCGACACCCGCGACCCGCAAGCCATTGAGGCCGCCATCCAGG
ACAACACCAAGGCAATTTACTTTGAACCGGTTACCAACCCCTTGTTGCAGGTGACCTCGGTACGCCAGGTGGCCGTGATT
GCCAAGCAACACGGGCTCCTGACGATCGTCGATAACACCTTTTTGAGCCCCTACCTCTTAAAGCCACTAGAGCTGGGCGC
CGATCTGGTCATCCATTCGGCGACTAAGTACTTAGCCGGGCACTCGGAACTCTCGGCCGGGGCCGTGATCGTCAACGATC
CGCGCTTAGCCGACCGGGTTTACTTCGTCCAAAACGCCCTCGGCGGGATTTTGTCGCCGGAAGGGGCCAACGAACTGGCC
CGCGGGATCAAGACACTCGGGATCCGCTTGGACCGCCAAATTGAAAACCTGGTGGAAGTCGTGAAGTTCCTGGAAACCCG
GCCGGAAGTCCAGCGGGTGTACTACCCGGGGTTGCCGGGCCACGAGGGTTACGAAGAATTGCGCCAGGAGGCCAAGGGGG
CCGGGGCGGTGCTCTCCTTTGAGCTAAGCGGGGCGGTCGACCCGGTCGCCTTCGTCAACGGCCTGCGCCTCTTCACCCGC
GCCGTTAGCCTCGGGGCCGTCGAGAGCCTGGTCGAGTTGCCCAGCAAGATGAGCCACGCCGAATTAACGTCCGAAGAACA
GTTGGCGGCCGGGATTAAACCGGGGCTGATCCGGTTGGCGATCGGGATCGAAGACGTGACCGACCTGATTGAAGACCTCG
CCCAGGCGCTGGACCAAGCCGAACTAGTGACTACCAAAGGAAGTGTTGAAGATGACCAAACAACCGCAATCAATTGA

Protein sequence : 
MTKLDTQLVHGPAVNDNCTGAVTTPIYKATTFEYPEIGAPVTYDYSRSGNPTRQAVENQLATLEGGQRAFTFASGMAAIH
AALAIFKAGDHLIVGDQIYGGTFRLLYQFFARWGLKITAVDTRDPQAIEAAIQDNTKAIYFEPVTNPLLQVTSVRQVAVI
AKQHGLLTIVDNTFLSPYLLKPLELGADLVIHSATKYLAGHSELSAGAVIVNDPRLADRVYFVQNALGGILSPEGANELA
RGIKTLGIRLDRQIENLVEVVKFLETRPEVQRVYYPGLPGHEGYEELRQEAKGAGAVLSFELSGAVDPVAFVNGLRLFTR
AVSLGAVESLVELPSKMSHAELTSEEQLAAGIKPGLIRLAIGIEDVTDLIEDLAQALDQAELVTTKGSVEDDQTTAIN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-80 44
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-79 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LBFF_0855 YP_007995032.1 Cystathionine beta-lyase BAC0207 Protein 9e-65 42