Gene Information

Name : LBFF_0808 (LBFF_0808)
Accession : YP_007994988.1
Strain : Lactobacillus fermentum F-6
Genome accession: NC_021235
Putative virulence/resistance : Unknown
Product : Transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 857326 - 858636 bp
Length : 1311 bp
Strand : +
Note : -

DNA sequence :
ATGGCAACTTTACCGGAAAAACGAGTTAATTTCAATCCTAAATTACATATTTCGCACACTGGTGGTGAACTTTCTACTGA
TGCTGGGCTAGTGTTGGTCAAAGAATTAATGGCGCAACTCAATTTCACGACCTTAGCGTATCAATTAGTCCATTTTGATG
ACCAGCGCCATTACGCTCGTTACAGCAACGTTAGTCTACTAGAACAGGTCGTGCTGCAGTTGATCGCCGGTTACCCGGCC
GATCTAGCTGCCACCAGTTTGCGCAATGACCCCACATTTAAATTACTATTGGCACAACCGCAATTGGCCTCACAACCGTC
ATTATCCCGTTTTTGGCAACGCTGTGACGAGCAGACCATCACCTCATTACAAACGTTGAATCAAGCATTGCTTGACCAAG
CATGGACTGGCGCCAAGCAACAACAGCTGATCCTCGATATTGACTCGACTCACGCCGATACTCATGGTCATCAGGAAAAA
ACGGCCTTTAATGCGCATTACGGTACCACGGGTTACCATCCGCTGGTCGCTTTTGACGGGCAAACGGGCCACTGTTTAAA
GGCTCAATTGCGCCCAGGTAATGTTTATACCAGTACGGATATTGCCCCCTTTATCACGCCACTACTACAGCACTATCATC
AAGTCAAACCGAACGCTGATATCTTGGTCCGCGGGGATAGTGGCTTTGCGACTCCAGAATTATACGAAACTTGTGAAGCC
AACGACACTTTTTACTTGATCCGCCTGAAAGCCAATCGGCGGCTGAACCAACTGGCTGAACGTTTTGTTCAGATCAGTGA
TGGGCAGAATTGGACTGAGACCGAGGTCCATTATTATCGCGCGTCTTATCAAGCCCGATCATGGCCTAAGCCGCGCCAGA
TCTATATTAAATCAACTCGACCAGCTAGTGAATTGTTATTTCAACATGAATACCTTGTGTCCAATTTAACGAGTTTTGTC
GCCGAAGATGCGTTTCAAGCCTATCATCAACGAGGCCAAATGGAAAATTATATCAAGGAAGCCAAGGCTGGCTTTTACCT
TGATAAAATGACTAGCTCGCAATTTATACCAAATTATGCCCGCATGATGCTCAGTGTCCTCGCTTATAATTTAGTCAGCT
TGATGCGCCAATTGTTGCCTGTACAACATCAGCGATTACAGGTTACAACCTTGCGCTTATGGCTGTTTAAAGTAACGGGT
AAGCTGGTGACCAGCGGCCGGCAATTTTATCTAAAATTAAGCCGCCACCACGTCTATCAGGATTTGTTTTATCAACTACT
AGCTCGAATCCAAGCGCTACAGTGGGGCTAA

Protein sequence :
MATLPEKRVNFNPKLHISHTGGELSTDAGLVLVKELMAQLNFTTLAYQLVHFDDQRHYARYSNVSLLEQVVLQLIAGYPA
DLAATSLRNDPTFKLLLAQPQLASQPSLSRFWQRCDEQTITSLQTLNQALLDQAWTGAKQQQLILDIDSTHADTHGHQEK
TAFNAHYGTTGYHPLVAFDGQTGHCLKAQLRPGNVYTSTDIAPFITPLLQHYHQVKPNADILVRGDSGFATPELYETCEA
NDTFYLIRLKANRRLNQLAERFVQISDGQNWTETEVHYYRASYQARSWPKPRQIYIKSTRPASELLFQHEYLVSNLTSFV
AEDAFQAYHQRGQMENYIKEAKAGFYLDKMTSSQFIPNYARMMLSVLAYNLVSLMRQLLPVQHQRLQVTTLRLWLFKVTG
KLVTSGRQFYLKLSRHHVYQDLFYQLLARIQALQWG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0959 YP_001198325.1 transposase Not tested 89K Protein 9e-110 54
SSU98_0966 YP_001200524.1 transposase Not tested 89K Protein 9e-110 54