Gene Information

Name : LBFF_0057 (LBFF_0057)
Accession : YP_007994262.1
Strain : Lactobacillus fermentum F-6
Genome accession: NC_021235
Putative virulence/resistance : Unknown
Product : Peptidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 69244 - 70395 bp
Length : 1152 bp
Strand : +
Note : -

DNA sequence :
ATGATGGATCAAACCGAACGGACCCGGGTGCTTAGCGACCTGGTCAAAATTAATAGTGTCAACGGCAATGAACTAGAAGT
GGCCAATTACTTGCGCCGCCTGTTTGAACAGCACGGGTTGACGGCCGACGTCCAGCCCTTCGGCGAGCAGCGGGCCAACC
TGATTGTAGAGGTGGGCGCCGGTAAACCAATCCTGGGGATCACCGGCCACATGGACACGGTCGCCCTGGGCGATGAAAAG
AAGTGGCACCACGCCCCCCTGAGCGCCACGATTGAAGGGGACCGCCTGTACGGACGAGGGGCCGCCGACATGAAGTCGGG
CCTGGCCGCCCAGGTGATTGCCCTGATTGAATTGGTTGAATCAAAAACCCTGACTGGTCACGTCCGCTTCATCGCTACGG
CCGGTGAGGAGTACGGGACCCCGGGTGCTAACCGCCTGGAAGAAGCGGGGGTGGCTAAGGACCTGAACGCCCTGGTGGTC
GGGGAGCCCACCAGCGGGAACGTCATCTACGCCCACTCGGGAAGCTACAACTACCGGATCGTTTCAACTGGCCAGGCGGT
GCACTCTTCGGAACCGGAACGCGGCCAAAATGCCCTGGAGCCCCTGGTCGACTTTGCCCTGGCCGAACGCGACCTCTTCT
TTGACGTTCCGGATGACCCCTGCCTGGGGCCGCTCAAGCACTCGGTAACGATTATTCAAGGGGGCGAGCAGGTCAACACG
ATCCCGGACTACGCGGAACTGCGGGGGAACATCCGCCCCACGATGCGCTTTGATAACGACCACGTCACCGCCCGTTTGCA
GGCCGCCGTGGACCGGCTTAACCAGGAGGGTGCTGCCCATTTAACCCTGGAAGTGCTCCACTCCTGGCGCCCGGTGGCCT
CCAATCCCAACGGTGACTTTGTCAAGCGGGCCCTACAAGCTAGCCAGGAGGCCTTTGCAAAGTACCCGGGGCACGCGACC
CCAGAACTCGGGGTCATCCACGGGGCGACCGACGCTTCGGTTTTCGTCAAGCACCACCACGACCTGCCGGTGATTTTACT
GGGGGCCGACGACTGGAACATTTCCCACCAAGTTAACGAGTACACCACCCTGTCTTCTTTTGAGGCAACGATTGAAGCTT
ACAAGCGCTTGATCCCGGCCTTTTTTGAGTAA

Protein sequence :
MMDQTERTRVLSDLVKINSVNGNELEVANYLRRLFEQHGLTADVQPFGEQRANLIVEVGAGKPILGITGHMDTVALGDEK
KWHHAPLSATIEGDRLYGRGAADMKSGLAAQVIALIELVESKTLTGHVRFIATAGEEYGTPGANRLEEAGVAKDLNALVV
GEPTSGNVIYAHSGSYNYRIVSTGQAVHSSEPERGQNALEPLVDFALAERDLFFDVPDDPCLGPLKHSVTIIQGGEQVNT
IPDYAELRGNIRPTMRFDNDHVTARLQAAVDRLNQEGAAHLTLEVLHSWRPVASNPNGDFVKRALQASQEAFAKYPGHAT
PELGVIHGATDASVFVKHHHDLPVILLGADDWNISHQVNEYTTLSSFEATIEAYKRLIPAFFE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dapE CAA07459.1 succinyl-diaminopimelate desuccinylase Not tested Internalin Protein 2e-64 42
unnamed CAC20637.1 - Not tested Internalin Protein 3e-65 42