Gene Information

Name : LBFF_0400 (LBFF_0400)
Accession : YP_007994594.1
Strain : Lactobacillus fermentum F-6
Genome accession: NC_021235
Putative virulence/resistance : Unknown
Product : Transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 452356 - 453543 bp
Length : 1188 bp
Strand : +
Note : -

DNA sequence :
ATGAACCAGTTTAACAAAGATATTATCGCAGCGCTATCTTCCGACAAAGATATTACTCTGAATGAAGTCTTACGTCGTCA
AATCGAAGTGGCCGCTAATCAGTTCCTTCAAAATGAACTGACTGCGGTGCTAGGCTACGAACCACATACTCGGATCGACC
GATTAAAAGACGACGTGAACTACCGGAACGGGACGTACACCCGCACTATCGACACTGAGTACGGTGAAATTAATCTGACG
ATCCCACGGGACCGGTTAAACAAGTTTCAAAACGCCCTCTTCCCTCCTTACGTGCGTCGGACTGATGGACTGGAGGAAAT
GGTCATCAAGATGTACTCCAAGGGCGTCACAACTCGTGAAATCGCTGATATGGTTGAGAGAATGTACGGCCACTACTACT
CACTAACCACGGTTTCAAACATCACTAAGCGGACGGAACACCTGGTTGAAGAGTTCCACGAGCGCAGATTCAAGTACTCA
CAGTACGTCTGTGTGTTCCTCGATGCTACTTACATTCCGTTACGCCGTGGTACCGTTGAACGAGAAGCCGTTAACGTAGC
GATCGGAATTCGAAGTGACGGCGGTAAGGAAGTTCTTGACTACAGTATCGCACCGACCGAGAACGGAGCCGCTTGGTCTG
AACTACTCCAGGGATTACGCGCACGGGGGATTAAAGATATTCAGTTGTTCATCGCCGACGGTTTAGTTGGACTTCAATCT
GCGATTGAGGCTAACTACCCGCAGGCAAAGTTTCAACGGTGCTGGGCCCACGCAGAGCGCAACCTTTTAGGGTACGTTCG
CAAAAACGATCTCAGGGAGATTATCACCGACTTTAAGGCTATTCGGCAAGCAGAGAACCTACAAGCCGCCAAAGAACGAT
TGGCGGCTTTCAGTGCTAAGTGGGAGTCCAGTTATAAGCGTCGAATCAAGAATCTAGTCCAAATGGAGGAGCTATTCACG
TTCTTCAGTTTTCCAACTGCGATCCGTCAGACCATCTACTCGACGAACCTAATTGAGTCGTTCAATAAGAGCCTGAAGAA
GATGGTCCGACGTAAAGAGCAGTTCCCAAACGAAGGGGCCCTCGATCGCTTTATCATGACGCAAGTAATGGAGTACAACG
ATAAATTTGAGAATCGAGCACATCGGGGATTCAAGGACTGTCACGACACGCTTGATTCGATGTTTTAG

Protein sequence :
MNQFNKDIIAALSSDKDITLNEVLRRQIEVAANQFLQNELTAVLGYEPHTRIDRLKDDVNYRNGTYTRTIDTEYGEINLT
IPRDRLNKFQNALFPPYVRRTDGLEEMVIKMYSKGVTTREIADMVERMYGHYYSLTTVSNITKRTEHLVEEFHERRFKYS
QYVCVFLDATYIPLRRGTVEREAVNVAIGIRSDGGKEVLDYSIAPTENGAAWSELLQGLRARGIKDIQLFIADGLVGLQS
AIEANYPQAKFQRCWAHAERNLLGYVRKNDLREIITDFKAIRQAENLQAAKERLAAFSAKWESSYKRRIKNLVQMEELFT
FFSFPTAIRQTIYSTNLIESFNKSLKKMVRRKEQFPNEGALDRFIMTQVMEYNDKFENRAHRGFKDCHDTLDSMF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0595 NP_814357.1 ISEf1, transposase Not tested Not named Protein 2e-89 49
unnamed AAM21176.1 transposase Not tested Not named Protein 4e-89 48
unnamed AAM21184.1 transposase Not tested Not named Protein 4e-89 48
ef0057 AAM75262.1 EF0057 Not tested Not named Protein 4e-89 48