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Name : LBFF_0034 (LBFF_0034) Accession : YP_007994239.1 Strain : Lactobacillus fermentum F-6 Genome accession: NC_021235 Putative virulence/resistance : Virulence Product : Clp-like ATP-dependent protease binding subunit Function : - COG functional category : - COG ID : - EC number : - Position : 36834 - 38927 bp Length : 2094 bp Strand : + Note : - DNA sequence : ATGGCACGAATTCCAATAGATCCATTTAACAACGATATGGACGACTTATTTAACCAACTCATGGGGGGAATGAACGGGTT CAACAGCGAAAACCGCCGTTACCTGATTAACGGGCGCGAAGTAACGCCTGAAGAGTACGCCGCCTTTCGCCAGACCGGGA AGCTCCCGGGTGCAACTGACCCAACCCAAGCAAAAACTAAGCAACCACAACCAGACAGCATGCTAGCTAAGCTTGGCCGC AACTTGACGCAAGAAGCCAAGGAAGGCAAGCTCGACCCGGTGATCGGCCGTAACAAGGAGATTCAAGAAACCGCCGAGAT TCTGTCACGGCGGACCAAGAACAACCCAGTGTTAGTCGGTGACGCCGGGGTCGGCAAGACGGCGGTGGTGGAGGGCCTAG CCCAAGCCATCGTGGCCGGCGACGTTCCCGCTGCCATCAAGAACAAGCAGATTATTTCGATTGACATTTCCAGCTTGGAG GCCGGGACCCAATACCGGGGCTCCTTTGAAGAGAACATGCAAAAGCTGATCGACGAGGTCAAAAAGGACGGCAACGTGAT CCTCTTCTTCGATGAAATTCACCAAATCATCGGGGCCGGAAACGCCGGCGACGCCTCGGGTTCCAAGGGAATGGCTGACA TCTTAAAGCCGGCCCTTTCCCGCGGCGAAGTGACCTTAATCGGGGCCACCACCCAAGACGAGTACCGTAACACGATCTTA AAGGACGCCGCTTTATCCCGGCGGTTCAACCAAGTAACGGTTAACGCCCCGAGCAAGGAAGACACCTTCAAGATCCTGCA AGGTTTGCGTAAGCTTTACGAAAAGCACCACAACGTTTCCTTGCCTGACGAAGTCTTAAAGGCCGCCATCGATTACTCGG TTCAATACATTCCGCAACGCTCCTTACCTGACAAGGCGATCGACCTGATTGACGTCACGGCCGCTCACCTAGCTTCCAAG CACCCGGTCAAGGACGCCAAGACGATTGAAGAGGAGATCAAAAAGACCGAGGCCAAGCAACAAGAAGCGGTTGAAAAAGA GGATTACCAAGCCGCCCAAGAGGCCAAGGACCAGGTGGCCAAGTTGCAAGACCAACTCAAGGACCACTCCGAATCCGAAC GGGTCGTGGCAACGCCGAGTGACGTGGCCGCCGCCGTTGAACGGATGACCGGGATCCCGGTGTCCAAGATGGGTGCTTCT GATATCGAACGCTTAAAGGGCTTAGCCACCCGTTTGGAAGGCAAGGTTATCGGCCAACAAGAGGCCGTCGAAGCCGTGAG CCGGGCGATCCGGCGTAACCGGGCCGGCTTTGATGAAGGTAACCGGCCAATTGGGAGCTTCCTTTTCGTCGGCCCAACCG GGGTCGGTAAGACCGAATTGGCTAAGCAACTAGCCCTCGATATGTTTGGTTCCACCAACGACATCATCCGGCTCGACATG TCCGAATACACCGATCGGACGGCGGTTTCCAAGTTGATCGGGACCACCGCTGGCTACGTGGGTTACGACGATAACTCCAA CACCCTGACCGAAAAGGTACGGCGTCACCCGTACTCGATCGTCTTGCTCGACGAAATCGAAAAGGCCAACCCGCAAGTCA TCACCTTGCTCTTGCAAGTCTTAGATGATGGGCGCCTAACCGATGGGCAAGGGAACACGGTGGACTTCAAGAACACCATC ATCATCGCCACCTCTAACGCCGGCTTCAGTAGCGACGCCGTGGCGGGCGAGGATGCTAAGTTGATGGACAAGTTGCAACC GTACTTCCGGCCAGAATTCCTGAACCGGTTTAACGCAATCGTGGAATTCCACGCCCTGACCAAGGACGACTTAAAGCAAA TCGTCGACCTGATGTTAGCCGGGGTTAACGAAACCTTGGCCAAGAAGGGGATGGACGTCACGGTGACCGATGAAGTGAAG AACTACCTGATTGACAAGGGCTATGACAAGACGATGGGGGCCCGGCCACTGCGGCGGGTGGTGGAACGAGAGATCCGTGA CAAGGTGACGGATTACTACCTCGACCACCTGGACGAAAAGCACCTCGTGGCCACCTTAAAGGACGGCCAAGTCGTGATTG AACAAGCAAAGTAA Protein sequence : MARIPIDPFNNDMDDLFNQLMGGMNGFNSENRRYLINGREVTPEEYAAFRQTGKLPGATDPTQAKTKQPQPDSMLAKLGR NLTQEAKEGKLDPVIGRNKEIQETAEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVAGDVPAAIKNKQIISIDISSLE AGTQYRGSFEENMQKLIDEVKKDGNVILFFDEIHQIIGAGNAGDASGSKGMADILKPALSRGEVTLIGATTQDEYRNTIL KDAALSRRFNQVTVNAPSKEDTFKILQGLRKLYEKHHNVSLPDEVLKAAIDYSVQYIPQRSLPDKAIDLIDVTAAHLASK HPVKDAKTIEEEIKKTEAKQQEAVEKEDYQAAQEAKDQVAKLQDQLKDHSESERVVATPSDVAAAVERMTGIPVSKMGAS DIERLKGLATRLEGKVIGQQEAVEAVSRAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGSTNDIIRLDM SEYTDRTAVSKLIGTTAGYVGYDDNSNTLTEKVRRHPYSIVLLDEIEKANPQVITLLLQVLDDGRLTDGQGNTVDFKNTI IIATSNAGFSSDAVAGEDAKLMDKLQPYFRPEFLNRFNAIVEFHALTKDDLKQIVDLMLAGVNETLAKKGMDVTVTDEVK NYLIDKGYDKTMGARPLRRVVEREIRDKVTDYYLDHLDEKHLVATLKDGQVVIEQAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 6e-135 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LBFF_0034 | YP_007994239.1 | Clp-like ATP-dependent protease binding subunit | VFG0080 | Protein | 1e-154 | 51 |
| LBFF_0034 | YP_007994239.1 | Clp-like ATP-dependent protease binding subunit | VFG0079 | Protein | 2e-139 | 46 |
