Gene Information

Name : LBFF_0333 (LBFF_0333)
Accession : YP_007994529.1
Strain : Lactobacillus fermentum F-6
Genome accession: NC_021235
Putative virulence/resistance : Unknown
Product : Short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 370191 - 370922 bp
Length : 732 bp
Strand : +
Note : -

DNA sequence : 
ATGGAACTCAAGGATAAGGTTGTCTTTATTACCGGTTCAACCCGGGGAATTGGGGCGGCAACCGCCCTGGCCTTTGCTAA
GCAGGGGAGCCGCTTGGTGTTAAACGGACGCCACGACCTCGATGATGATATGAAGCAAAAGCTAGAAGAAGCTGGCGCCG
ATTACAAGTTCTTGATTGGTGACGTAGCTGATGAAGAATCGGTGGCTCAATTAGCCAAGGAGGCTTGGGATGCCTACGGG
CACATCGACGTCTTGGTTAATAACGCCGGGATCACCCGCGACCGTCTGATTGGCGGAATGAAGGTAGCAGACTTTGACCA
GGTGATCGCCGTTAACTTGCGGGGACCGTTTTTACTGATTAAGGCCTTGATCAAGAAGTTTAACAAGCAACGCTCTGGTG
CCATTATCAACCTGGCTAGCGTAGTTGGATTACACGGTAATGCCGGGCAGGCCAACTACTCGGCAAGTAAGGCCGGCATC
GTTGGCTTAACCAAGACGGTGGCTCGTGAAGGGGCCATGCGGGGAATTCGTTGCAACGCCATTGCACCCGGGATGATTGC
TAGCGACATGACGGCCGCCCTTTCCGAACGGGTTCAAGAGGGCATCGTGGAACAAATTCCGCTTAAGCGACTAGGAACGG
TCGATGAAGTGGCACAATGCGCAATCTTCTTGGCGCAAAATGATTACGTTACCGGCCAAGTATTGGTCGTTGACGGTGGG
ATGACGATTTAG

Protein sequence : 
MELKDKVVFITGSTRGIGAATALAFAKQGSRLVLNGRHDLDDDMKQKLEEAGADYKFLIGDVADEESVAQLAKEAWDAYG
HIDVLVNNAGITRDRLIGGMKVADFDQVIAVNLRGPFLLIKALIKKFNKQRSGAIINLASVVGLHGNAGQANYSASKAGI
VGLTKTVAREGAMRGIRCNAIAPGMIASDMTAALSERVQEGIVEQIPLKRLGTVDEVAQCAIFLAQNDYVTGQVLVVDGG
MTI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 2e-34 44
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 3e-34 44
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 3e-34 44
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 2e-34 44
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 7e-35 43