Gene Information

Name : LBFF_0299 (LBFF_0299)
Accession : YP_007994495.1
Strain : Lactobacillus fermentum F-6
Genome accession: NC_021235
Putative virulence/resistance : Unknown
Product : Ribonucleoside-diphosphate reductase, alpha subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 338121 - 340292 bp
Length : 2172 bp
Strand : -
Note : -

DNA sequence :
ATGGCTCTTTCAGAAATTGATATGACCAAGGTGAAGTACTTCGACCTAAACAACGAGATCAACATCCCCAAGGATGGTCA
AATCCAGTTGAACCTCGATCAAGAAGCCCTAGACGACTTTATTAAGGAAAACGTGGAACCAAACACCAAGAAGTTCTCCT
CCGTAATGGAACGGCTAAACTGGTTAATCGAAAACGACTACCTCGAAGAAGACTTTATTCGCCAATATACGCCCGCCTTT
TTAGATCGACTCTACCAATACTTAAAGGAACAAGACTTCCACTTCCACTCCTTTATGGCCGCCTACAAATTTTACGCCCA
ATACGCCATGCGGACCAACGACAAGGAATACTACCTGGAAAACTACATCGACCGGGTGGCTATGAACGCCTTGTACCTAG
CTAACGGGGACGAACAACTGGCCATGGACCTGGCTGATGAGTTAATCCACCAACGCTACCAACCGGCCACGCCAACCTTC
TTAAACGTTGGTCGCAAGCGGCGCGGGGAATTCGTTTCCTGCTTTGAAATCCAAGCTACCGATGACATGAACACGATCGG
GCGGACGATCAACTCCGCTTTGCAACTATCCAAGATCGGTGGCGGGGTCGGCATCAACTTAAATAACCTCCGCGAAGCCG
GCGCCCCAATCAAGAAGATCAAGGGGGCCGCTTCCGGGGTTGTCCCGGTCATGAAGCTCTTAGAAGACGCCTTTTCATAC
TCCAACCAACTGGGGCAGCGCCAAGGAGCGGGGGTTGTTTACCTCTCCGTCTTCCACCCCGACATCATTGACTTTTTGGG
GGCCAAAAAGGAAAACGCCGACGAAAAGGTTCGCTTAAAGACCCTTTCCCTGGGGGTAACGGTGCCGGACAAGTTCTACC
AGTTAGTGGAAGAAGACGCCCCAATGTACCTCTTCTCCCCGTACGACGTGGAACGAATCTACGGTAAGCCCTTCTCTTAC
GTTGACATCACCAAGGAATACGACAACCTGGTTGCTAACCCTGAAATCACCAAGAAGAAGGTCAACGCCCGTGAGTTGGA
AGACGAAATCTCCAAGTTACAACAAGAATCTGGCTACCCATACATTGTTAACGTCGATACGGTTAACAAGGCCAACCCAA
TTGAAGGAACAATCGTAATGTCCAACCTCTGTTCCGAAATTGCCCAAGTTCAGATTCCGTCCCGGGTCAACGATGACCAA
ACCTACGAAACCCTCGGCACCGACGTTTCTTGTAACCTCGGTTCCACAAACATCGCTAACCTGATGGAAACACCAGACCT
CGGACGCTCCGTTCGGGCGATGATGCGTGGTCTGACCCACATTTCCGATGCTGAAAGCTTAACCGTAGTCCCATCCATCA
AGCACGGCAACGACCTTTCCCACTCGGTTGGGTTAGGAGCGATGGGGCTACACGGCTTCTTAGCTAAGCACCACATCATG
TACGGTTCTCCGGTTGCCCTTGAGTTCACCAGCGTTTACTTCATGCTTTTAAACTACTGGACCTTAGTGGCTTCTAACGA
AATCGCCCAGGAAAAGGGTGAAAGCTTTGCCAACTTCGAACGGTCTGCCTACGCTGACGGTTCCTACTTTGACAAGTACC
TGACTAAGGACTGGGGGCCAAAATCCGCCGCCGTTAAGGAACTCTTTGCCGGCTTCTTTATCCCAACCCCAGACGACTGG
CAAGAACTCAAGCAACGGGTTCAAGAATCCGGTCTCTACAATGCCTACCGCCTCGCCGTGGCACCGAACGGCTCGACCTC
TTACATTGGGGACTCCACGTCTAGCCTACACCCCATCATCAACCGGATCGAAGAACGGCAAGAAAAGATGATTGGTAAGG
TCTACTACCCGGCCCCATACCTATCCAACGACACGATGCCGTACTACCGCTCCGCTTACGATACGGACATGCGTAGCGTC
ATTGATACCTACGCCGCCGCCCAGGAACACGTCGACCAGTCCCTGTCGATGACCCTGTTCATGCGCTCGACCATTCCAGC
CGGCATGTACGAATGGAAGGACGGGCGGACGGAAAAGATGACCACCCGCGACCTAAACATCCTTCGTCACTACGCCCACC
AAAAGGGCATTAAGTCGATTTACTACATCCGGACCTTCACGGATGATAACGAAGAAGTCGGCGCCAACCAATGTGAATCT
TGCGTAATTTAA

Protein sequence :
MALSEIDMTKVKYFDLNNEINIPKDGQIQLNLDQEALDDFIKENVEPNTKKFSSVMERLNWLIENDYLEEDFIRQYTPAF
LDRLYQYLKEQDFHFHSFMAAYKFYAQYAMRTNDKEYYLENYIDRVAMNALYLANGDEQLAMDLADELIHQRYQPATPTF
LNVGRKRRGEFVSCFEIQATDDMNTIGRTINSALQLSKIGGGVGINLNNLREAGAPIKKIKGAASGVVPVMKLLEDAFSY
SNQLGQRQGAGVVYLSVFHPDIIDFLGAKKENADEKVRLKTLSLGVTVPDKFYQLVEEDAPMYLFSPYDVERIYGKPFSY
VDITKEYDNLVANPEITKKKVNARELEDEISKLQQESGYPYIVNVDTVNKANPIEGTIVMSNLCSEIAQVQIPSRVNDDQ
TYETLGTDVSCNLGSTNIANLMETPDLGRSVRAMMRGLTHISDAESLTVVPSIKHGNDLSHSVGLGAMGLHGFLAKHHIM
YGSPVALEFTSVYFMLLNYWTLVASNEIAQEKGESFANFERSAYADGSYFDKYLTKDWGPKSAAVKELFAGFFIPTPDDW
QELKQRVQESGLYNAYRLAVAPNGSTSYIGDSTSSLHPIINRIEERQEKMIGKVYYPAPYLSNDTMPYYRSAYDTDMRSV
IDTYAAAQEHVDQSLSMTLFMRSTIPAGMYEWKDGRTEKMTTRDLNILRHYAHQKGIKSIYYIRTFTDDNEEVGANQCES
CVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 4e-166 51